Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NPM1P6-201ENST00000521088 871 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AP000790.1-201ENST00000528891 737 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 CYCSP28-201ENST00000534284 321 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.84□□□□□ -1.63
TRIM38O00635 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 SULT1C2P1-202ENST00000562418 459 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC079171.1-201ENST00000568788 914 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC002400.1-201ENST00000569310 726 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC138915.2-201ENST00000569776 97 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AP005119.2-201ENST00000579735 1105 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 AC133552.5-201ENST00000604266 540 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC091946.2-201ENST00000606105 291 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC010857.1-201ENST00000606398 594 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC068944.2-201ENST00000610373 403 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC083809.1-201ENST00000615051 472 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 MIR6758-201ENST00000620653 63 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM38O00635 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 DHX9P1-201ENST00000436565 3076 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM38O00635 AC026951.1-201ENST00000559530 2459 ntBASIC4.84□□□□□ -1.64
TRIM38O00635 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.84□□□□□ -1.64
TRIM38O00635 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
TRIM38O00635 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
TRIM38O00635 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM38O00635 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM38O00635 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM38O00635 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM38O00635 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM38O00635 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 Y_RNA.25-201ENST00000362528 102 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 RNU6-441P-201ENST00000384545 106 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 MIR298-201ENST00000401212 88 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM38O00635 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM38O00635 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM38O00635 AC009480.2-201ENST00000422916 432 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 ATP5F1P1-201ENST00000433775 569 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TRIM38O00635 AL359265.2-201ENST00000434367 631 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AL008629.1-201ENST00000438615 184 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM38O00635 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM38O00635 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM38O00635 VN1R32P-201ENST00000452234 905 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM38O00635 AC010326.1-201ENST00000462726 602 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AL672167.3-201ENST00000465951 960 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 RN7SL385P-201ENST00000468873 276 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TRIM38O00635 GAPDHP36-201ENST00000480688 918 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM38O00635 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM38O00635 AC109635.3-201ENST00000529536 185 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM38O00635 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM38O00635 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM38O00635 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 HIGD1AP17-201ENST00000554576 276 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 DUXAP1-201ENST00000556632 463 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 VN1R82P-201ENST00000601481 356 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 RPL26P30-202ENST00000602923 645 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AC011451.2-201ENST00000604303 598 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AC080013.4-201ENST00000607624 649 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 AL133243.1-201ENST00000614487 366 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AC069209.1-201ENST00000619282 651 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AL359715.5-201ENST00000623431 443 ntBASIC4.83□□□□□ -1.64
TRIM38O00635 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM38O00635 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM38O00635 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM38O00635 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 SCN1A-220ENST00000641603 12506 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM38O00635 AC010928.1-201ENST00000592477 1447 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 LINC01109-201ENST00000603837 3081 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AL672167.1-205ENST00000641112 3080 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
TRIM38O00635 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM38O00635 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM38O00635 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM38O00635 RPL32P3-201ENST00000359025 275 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 Y_RNA.311-201ENST00000365068 96 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms