Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ELL2P4-201ENST00000446870 1376 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 AC026951.1-201ENST00000559530 2459 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SDCBPO00560 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SDCBPO00560 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SDCBPO00560 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SDCBPO00560 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SDCBPO00560 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SDCBPO00560 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SDCBPO00560 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDCBPO00560 MIR218-2-201ENST00000385006 110 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 RAB9AP3-201ENST00000412737 573 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 CRYBB2P1-203ENST00000415709 538 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.81□□□□□ -1.96
SDCBPO00560 BX842559.1-201ENST00000419615 532 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 AC018644.1-201ENST00000429934 551 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 HSPD1P21-201ENST00000436541 245 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.81□□□□□ -1.96
SDCBPO00560 AL133547.1-201ENST00000448546 220 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 RAB9AP1-201ENST00000449393 573 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AC022336.1-201ENST00000475510 337 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AC025518.1-201ENST00000479856 347 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 KCTD9P5-201ENST00000504141 1170 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SDCBPO00560 FCF1P8-201ENST00000510322 597 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 RNU1-143P-201ENST00000516296 146 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 RN7SKP116-201ENST00000516902 319 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AC023632.4-201ENST00000517783 191 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 MTCO1P49-201ENST00000523429 802 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.81□□□□□ -1.96
SDCBPO00560 AL161713.1-201ENST00000555538 145 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 AC006254.3-201ENST00000603353 884 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AC012213.4-201ENST00000606457 354 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 U1.23-201ENST00000610293 146 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 RNU1-68P-201ENST00000615382 146 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 U1.39-201ENST00000621562 146 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 U6.98-201ENST00000637157 84 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.81□□□□□ -1.96
SDCBPO00560 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDCBPO00560 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 AL161912.2-201ENST00000565707 3007 ntBASIC2.81□□□□□ -1.96
SDCBPO00560 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SDCBPO00560 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDCBPO00560 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.8□□□□□ -1.96
SDCBPO00560 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.8□□□□□ -1.96
SDCBPO00560 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDCBPO00560 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDCBPO00560 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDCBPO00560 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDCBPO00560 Y_RNA.62-201ENST00000362840 99 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SDCBPO00560 AC025750.1-201ENST00000399891 379 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 HMGB3P23-201ENST00000414981 585 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.8□□□□□ -1.96
SDCBPO00560 RPL30P3-201ENST00000424262 333 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 CST9LP2-201ENST00000437612 320 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 RPS15AP29-201ENST00000445539 400 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AC115115.1-201ENST00000449927 248 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 CFTRP1-201ENST00000456646 183 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AP002884.2-201ENST00000471647 395 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AC010683.1-201ENST00000473673 378 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AC112198.1-201ENST00000505369 1220 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 APOOP4-201ENST00000513530 597 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 SCARNA20.6-201ENST00000517251 106 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.8□□□□□ -1.96
SDCBPO00560 OR4R3P-201ENST00000525084 838 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 OR8I1P-201ENST00000529291 931 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.8□□□□□ -1.96
SDCBPO00560 MTND5P21-201ENST00000531961 522 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.8□□□□□ -1.96
SDCBPO00560 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.8□□□□□ -1.96
SDCBPO00560 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.8□□□□□ -1.96
SDCBPO00560 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.8□□□□□ -1.96
SDCBPO00560 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.8□□□□□ -1.96
SDCBPO00560 AC107294.3-201ENST00000609211 526 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AC243312.2-201ENST00000623340 601 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AC073476.4-201ENST00000628409 72 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.8□□□□□ -1.96
SDCBPO00560 AC009093.8-201ENST00000641769 292 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 AL353746.1-201ENST00000566293 6881 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
SDCBPO00560 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.8□□□□□ -1.96
SDCBPO00560 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SDCBPO00560 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.79□□□□□ -1.96
SDCBPO00560 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 AL139811.1-201ENST00000424779 2299 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 U3.11-201ENST00000364476 212 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 U3.15-201ENST00000365398 212 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms