Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIR7151-201ENST00000617477 60 ntBASIC4.16□□□□□ -1.74
CCDC188H7C350 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC188H7C350 AC099654.9-201ENST00000637055 678 ntBASIC4.16□□□□□ -1.74
CCDC188H7C350 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC188H7C350 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC188H7C350 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC188H7C350 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC188H7C350 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC188H7C350 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC188H7C350 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC188H7C350 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
CCDC188H7C350 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC188H7C350 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC188H7C350 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC188H7C350 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC188H7C350 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC188H7C350 SNORA56-201ENST00000383966 129 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 MIR1250-201ENST00000408098 113 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 RPL7AP73-201ENST00000413490 353 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 FAR2P4-202ENST00000425399 584 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC092634.2-201ENST00000428146 1010 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AL365396.1-201ENST00000430854 671 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC083863.1-201ENST00000438811 231 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 RPL6P9-201ENST00000466502 859 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 RN7SL481P-201ENST00000477764 299 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC018797.3-201ENST00000513388 1241 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 SNORA19.3-201ENST00000516165 130 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 OR8L1P-201ENST00000534005 955 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC188H7C350 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC188H7C350 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC122134.1-202ENST00000569111 1201 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 MIR5708-201ENST00000579723 85 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC188H7C350 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC007566.2-201ENST00000603642 413 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AP003973.1-201ENST00000604639 691 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AL121652.1-201ENST00000608851 448 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC099676.1-201ENST00000608886 657 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AP005137.2-201ENST00000609238 400 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AC022306.3-201ENST00000619930 550 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 AL445984.1-201ENST00000637834 659 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC188H7C350 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CCDC188H7C350 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC188H7C350 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CCDC188H7C350 AL356489.2-201ENST00000566968 3528 ntBASIC4.15□□□□□ -1.75
CCDC188H7C350 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC188H7C350 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC188H7C350 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC188H7C350 AC011978.2-201ENST00000569835 2054 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 RNU6-115P-201ENST00000364310 107 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AL138878.1-201ENST00000405131 347 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 MTCO3P31-201ENST00000405526 789 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AMD1P2-201ENST00000412936 992 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 USP9YP21-201ENST00000420603 432 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 COX6B1P7-201ENST00000430845 235 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC092393.1-201ENST00000439625 742 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC188H7C350 Z77249.1-201ENST00000444622 1175 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 RPL38P1-201ENST00000460914 211 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC006463.2-201ENST00000473326 348 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 GAPDHP39-201ENST00000481866 979 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC069528.1-202ENST00000482888 637 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC188H7C350 DYNLL1P6-201ENST00000503440 264 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 PRELID3BP7-201ENST00000503606 469 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC025674.1-201ENST00000507074 324 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC188H7C350 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 MTCO3P15-201ENST00000526563 574 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 TVP23BP1-201ENST00000557500 617 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 MIR4330-201ENST00000579077 105 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC188H7C350 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms