Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC025445.1-201ENST00000502728 300 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 MTCO1P35-201ENST00000515270 228 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 IGLV3-26-201ENST00000520756 302 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AP002812.4-201ENST00000532139 286 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC009094.1-201ENST00000564443 426 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC022655.2-201ENST00000577280 318 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC020910.2-201ENST00000603635 610 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AL392112.1-201ENST00000605115 829 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AL591034.3-201ENST00000605511 685 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 U6.48-201ENST00000618523 106 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 MTND4P10-201ENST00000446199 1363 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RNF6P1-201ENST00000444889 1784 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 IQCB2P-201ENST00000401788 1633 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AL022722.2-201ENST00000402519 180 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AL603766.1-201ENST00000407763 664 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC092745.2-202ENST00000411880 369 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RAC1P3-201ENST00000416129 580 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RPS23P10-201ENST00000416185 486 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RWDD4P2-201ENST00000426392 563 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 HIGD1AP12-201ENST00000427832 281 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RPS27AP12-201ENST00000429552 465 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 HIGD1AP4-201ENST00000430194 280 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 MOB1AP1-201ENST00000430903 535 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 HMGB1P45-201ENST00000435986 653 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 SETD6P1-201ENST00000444575 317 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC114755.5-201ENST00000447760 831 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 NUTF2P7-201ENST00000453086 375 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 MRPL35P4-201ENST00000453682 566 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 USP9YP25-201ENST00000457708 443 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC079804.1-201ENST00000461922 436 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RPS7P7-201ENST00000463499 571 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 BNIP3P41-201ENST00000503774 571 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC008565.1-201ENST00000509046 885 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC022790.1-201ENST00000522872 204 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 DEFB109D-201ENST00000529497 240 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 ZNF321P-202ENST00000550843 495 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 CYP2C60P-201ENST00000566088 139 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 NF1P5-201ENST00000588287 448 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 ZNF92P3-201ENST00000596594 954 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC013444.2-201ENST00000603317 787 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC025946.2-201ENST00000603398 234 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AL139344.1-201ENST00000605228 195 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC092653.1-201ENST00000608509 531 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC015726.3-201ENST00000624501 418 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 MIR6715B-201ENST00000637172 77 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 MIR492-201ENST00000638676 116 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX9Q9Y5X1 AC104446.1-201ENST00000613728 1321 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms