Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RN7SKP299-201ENST00000606679 301 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 AP000238.1-201ENST00000608759 426 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 AL031666.3-201ENST00000609320 1006 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 AC093799.2-201ENST00000610062 578 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 AC073114.1-201ENST00000612027 490 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 VN1R74P-201ENST00000613259 503 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 AL133243.1-201ENST00000614487 366 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 AL138721.1-201ENST00000616756 179 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 FP325313.1-201ENST00000638228 703 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 MFSD8-245ENST00000641743 948 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 MAPK10-263ENST00000641052 4307 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 CR381670.1-201ENST00000624291 1693 ntBASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGB1Q9Y5G3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGB1Q9Y5G3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGB1Q9Y5G3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PCDHGB1Q9Y5G3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGB1Q9Y5G3 AC012020.1-201ENST00000624541 1728 ntBASIC4.21□□□□□ -1.73
PCDHGB1Q9Y5G3 AL118496.1-201ENST00000440201 1812 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 RNU1-15P-201ENST00000353977 144 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 RNA5SP502-201ENST00000362694 119 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 RNA5SP428-201ENST00000365129 132 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 RNU1-44P-201ENST00000384453 163 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 Y_RNA.559-201ENST00000384686 107 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL078604.1-201ENST00000404609 466 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL355379.1-201ENST00000405542 640 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 NPM1P11-201ENST00000417106 855 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL645608.4-201ENST00000423619 154 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC073335.1-201ENST00000427776 363 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 MTCO3P21-201ENST00000430791 643 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC008072.1-201ENST00000434254 824 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 GTF2IP7-202ENST00000436677 309 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 MTCYBP39-201ENST00000437562 491 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 ARL5AP2-201ENST00000444698 533 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 HMGB1P48-201ENST00000446155 598 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AP000936.2-201ENST00000447151 681 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL121877.1-201ENST00000453704 622 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC107401.1-201ENST00000503426 685 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC005178.1-201ENST00000508392 440 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 PARP4P3-201ENST00000510265 317 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 ACTR3BP3-201ENST00000565577 979 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC068790.7-201ENST00000602347 528 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC008745.1-201ENST00000604064 271 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC107304.1-201ENST00000604229 296 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC092354.2-201ENST00000607786 514 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AL161616.1-201ENST00000611867 286 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC109454.4-201ENST00000623411 649 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AF246928.1-201ENST00000623768 87 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 MIR4278-201ENST00000636094 69 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AF001550.2-201ENST00000636643 217 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 AC099654.2-201ENST00000433031 1980 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGB1Q9Y5G3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms