Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL035458.1-201ENST00000433096 585 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 RAB9AP1-201ENST00000449393 573 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 RPS4XP22-201ENST00000480755 780 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 AC106707.2-201ENST00000484182 374 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 MTATP6P22-201ENST00000507369 598 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 RN7SKP13-201ENST00000515933 244 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 U6.98-201ENST00000637157 84 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 USP8P1-201ENST00000494673 3183 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 RNU1-64P-201ENST00000365443 163 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC093578.1-201ENST00000415219 368 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 SYF2P2-201ENST00000417620 583 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 BX679664.1-201ENST00000434429 253 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 RPL5P13-201ENST00000462840 709 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 TRBV8-2-201ENST00000475637 270 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC078785.3-201ENST00000476607 425 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC110768.1-201ENST00000509222 400 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 RN7SKP82-201ENST00000516786 223 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC008083.2-201ENST00000546707 476 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 SS18L2P2-201ENST00000583960 235 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC093227.2-201ENST00000589357 285 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 LLPHP1-201ENST00000603571 367 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AL354950.1-201ENST00000614150 568 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 AC007496.3-201ENST00000624987 3443 ntBASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS29Q9UBQ0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 GABPAP-201ENST00000419271 1356 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 RNA5SP124-201ENST00000362739 110 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 RNU6-666P-201ENST00000363499 107 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 LIPT1P1-201ENST00000415870 1186 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 ATP5JP1-201ENST00000431631 322 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AC073063.1-201ENST00000434352 607 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 MTCYBP21-201ENST00000443300 1113 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 RPS20P32-201ENST00000456044 356 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 RPL31P53-201ENST00000457065 348 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 RPL7P48-201ENST00000461513 746 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 SNRPGP3-201ENST00000469405 227 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 RN7SL330P-201ENST00000469709 307 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AC078817.1-201ENST00000492623 435 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AC112198.1-201ENST00000505369 1220 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 OR4R3P-201ENST00000525084 838 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 OR4A2P-201ENST00000527276 913 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 PDCL2P2-201ENST00000533651 189 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 BNIP3P5-201ENST00000562290 498 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AL161912.2-201ENST00000565707 3007 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 AL021368.2-201ENST00000606125 5352 ntBASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS29Q9UBQ0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 CCNB2P1-201ENST00000399411 1150 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 SKINT1L-201ENST00000401057 817 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 MTCO3P31-201ENST00000405526 789 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 RNA5SP31-201ENST00000411144 127 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms