Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS11Q9H270 AC098614.4-201ENST00000607601 462 ntBASIC5.22□□□□□ -1.57
VPS11Q9H270 AC000068.2-201ENST00000608816 460 ntBASIC5.22□□□□□ -1.57
VPS11Q9H270 AC106028.5-201ENST00000610332 395 ntBASIC5.22□□□□□ -1.57
VPS11Q9H270 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS11Q9H270 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS11Q9H270 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS11Q9H270 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS11Q9H270 AC112487.2-201ENST00000637950 304 ntBASIC5.22□□□□□ -1.57
VPS11Q9H270 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS11Q9H270 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS11Q9H270 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS11Q9H270 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS11Q9H270 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS11Q9H270 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.57
VPS11Q9H270 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VPS11Q9H270 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VPS11Q9H270 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS11Q9H270 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.21□□□□□ -1.57
VPS11Q9H270 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC011155.1-201ENST00000316512 456 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 Y_RNA.263-201ENST00000364659 114 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS11Q9H270 UBBP2-201ENST00000376781 231 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC233728.2-201ENST00000425348 757 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC008850.1-201ENST00000427546 362 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 NDUFA5P4-201ENST00000436704 385 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 RPL36AP39-201ENST00000445859 318 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AL591473.1-201ENST00000464297 313 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC097173.1-201ENST00000505862 819 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 RN7SKP298-201ENST00000515950 94 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS11Q9H270 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC010547.6-201ENST00000571789 193 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS11Q9H270 AC103792.1-201ENST00000603591 919 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC010680.3-201ENST00000604215 520 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC012360.2-201ENST00000609349 391 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC022106.2-201ENST00000620114 757 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC002550.2-201ENST00000621246 394 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AF001550.2-201ENST00000636643 217 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AC099063.3-201ENST00000642066 185 ntBASIC5.21□□□□□ -1.58
VPS11Q9H270 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VPS11Q9H270 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS11Q9H270 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VPS11Q9H270 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS11Q9H270 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS11Q9H270 AC093535.2-201ENST00000624769 2326 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS11Q9H270 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS11Q9H270 RNA5SP319-201ENST00000362768 119 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 SNORA63-201ENST00000363450 132 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 Y_RNA.326-201ENST00000365176 113 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS11Q9H270 RNU6-253P-201ENST00000384730 105 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 SNORD65.1-201ENST00000390889 71 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 RNU6-332P-201ENST00000391193 108 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AL078599.1-201ENST00000402075 293 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 MIR1282-201ENST00000408865 101 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS11Q9H270 RNA5SP487-201ENST00000410186 122 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AL354751.2-201ENST00000415471 210 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms