Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 RPS15AP29-201ENST00000445539 400 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 PPIAP3-201ENST00000450588 505 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AP000873.1-201ENST00000463987 400 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 RPL9P32-201ENST00000464118 620 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 SETP14-201ENST00000497538 873 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 UBE2CP3-201ENST00000502715 450 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC110768.1-201ENST00000509222 400 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 Vault.1-201ENST00000516474 102 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AP000889.1-201ENST00000530968 660 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 TMF1P1-201ENST00000576058 373 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC115621.1-201ENST00000604653 858 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC010680.4-201ENST00000605334 543 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC073111.2-201ENST00000605657 1075 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC005014.3-201ENST00000605985 190 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC103710.3-201ENST00000608157 948 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AP000720.1-201ENST00000625091 483 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AC138393.1-206ENST00000540997 1886 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AP004289.2-201ENST00000444413 1457 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 RNA5SP119-201ENST00000362715 117 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 RNU6-525P-201ENST00000363685 104 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 RNU6-761P-201ENST00000384148 107 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 MIR184-201ENST00000384962 84 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC009237.5-201ENST00000414271 501 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC096644.3-201ENST00000416788 338 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 OR6K4P-201ENST00000423179 955 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AJ239321.1-201ENST00000424255 564 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 CR848007.2-201ENST00000424918 787 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AL158071.1-201ENST00000430315 461 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AL035246.1-201ENST00000433554 1255 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 C1DP3-201ENST00000455013 423 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 RPL7P47-201ENST00000497299 556 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 SNORA70.17-201ENST00000516449 133 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 RANP9-201ENST00000519957 271 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC011602.1-201ENST00000546484 331 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 DUXAP6-201ENST00000553858 601 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 GTF2IP22-201ENST00000554443 182 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 MIR5685-201ENST00000579080 79 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 MIR4425-201ENST00000580572 84 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC107982.3-201ENST00000584957 985 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 RPL21P136-201ENST00000605378 396 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC005972.3-201ENST00000606304 481 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC092953.2-201ENST00000608000 699 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AL133445.2-201ENST00000611191 527 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AL109620.1-201ENST00000618738 1197 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 CR392039.5-201ENST00000623201 510 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 AC025125.1-201ENST00000624743 1922 ntBASIC3.27□□□□□ -1.89
RSPO3Q9BXY4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AL118496.1-201ENST00000440201 1812 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 SNORA63.1-201ENST00000362493 131 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 RNU6-618P-201ENST00000363518 112 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC008280.1-201ENST00000418851 412 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 RPL30P3-201ENST00000424262 333 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 MRPS33P4-201ENST00000434892 317 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms