Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 MRPL42P4-201ENST00000453267 443 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 HMGN2P7-201ENST00000456186 273 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 NF1P3-201ENST00000457709 450 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 NDUFA5P9-201ENST00000472609 340 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 CAB39P1-201ENST00000502277 460 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX3Q99909 AP001781.1-201ENST00000530977 207 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 OR8K4P-201ENST00000534608 872 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.74□□□□□ -1.81
SSX3Q99909 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC068790.4-201ENST00000602474 263 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 AC069431.2-201ENST00000604149 1099 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 IGHV3-29-201ENST00000604817 344 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 AC144521.1-201ENST00000607148 956 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC099654.9-201ENST00000637055 678 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 AC090337.1-201ENST00000579651 2074 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX3Q99909 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX3Q99909 AF127577.6-201ENST00000623352 2191 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 SAGE4P-201ENST00000442271 3381 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SSX3Q99909 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX3Q99909 RNU5E-10P-201ENST00000363506 118 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 RNU6-335P-201ENST00000364563 113 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SSX3Q99909 MIR607-201ENST00000385241 96 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 MT-TC-201ENST00000387405 66 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AL138880.1-201ENST00000405824 642 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 HMGB3P5-201ENST00000428894 612 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC239367.2-201ENST00000447309 705 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX3Q99909 snoU109.3-201ENST00000459477 145 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 SYPL1P1-201ENST00000473622 768 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AC079203.1-201ENST00000487972 404 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 RPS26P15-201ENST00000488067 348 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 RPL36AP41-201ENST00000493820 306 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 MTND4LP2-201ENST00000502312 285 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC093752.1-206ENST00000511823 336 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC104057.1-201ENST00000515547 497 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC074051.3-201ENST00000570238 358 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC209154.1-201ENST00000582156 337 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.73□□□□□ -1.81
SSX3Q99909 AL445435.1-201ENST00000604232 665 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 HMGB1P50-201ENST00000605814 607 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AL354760.1-201ENST00000608357 643 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AC099676.1-201ENST00000608886 657 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AL133243.1-201ENST00000614487 366 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AP005019.3-201ENST00000620418 560 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX3Q99909 AC048347.1-201ENST00000624621 427 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX3Q99909 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX3Q99909 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX3Q99909 FAM35DP-201ENST00000323387 2712 ntBASIC3.73□□□□□ -1.81
SSX3Q99909 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSX3Q99909 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SSX3Q99909 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX3Q99909 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.72□□□□□ -1.81
SSX3Q99909 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms