Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RN7SL174P-201ENST00000475578 289 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC034222.1-201ENST00000494052 532 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 MTCO3P9-201ENST00000506989 781 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC097486.1-201ENST00000515331 210 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 ZNF705CP-201ENST00000530515 889 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC068714.1-201ENST00000559623 800 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC060780.2-201ENST00000589047 198 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 BX664608.1-201ENST00000610519 487 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNA5SP440-201ENST00000612665 119 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AL691477.1-201ENST00000624398 162 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LINC00622-201ENST00000562811 1570 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AP000473.2-201ENST00000602659 1537 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC027228.2-201ENST00000567141 2154 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AL157700.1-201ENST00000561973 1432 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC087516.1-201ENST00000561236 2428 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 PWAR1-201ENST00000624188 2414 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RNU5E-1-201ENST00000362477 120 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RNU6-845P-201ENST00000362578 103 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 U3.10-201ENST00000364459 214 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RNA5SP131-201ENST00000365452 119 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RNA5SP30-201ENST00000365552 115 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 SNORA51.6-201ENST00000384151 125 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 Y_RNA.460-201ENST00000384255 102 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RNU6-456P-201ENST00000384493 107 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 DSTNP4-201ENST00000399472 474 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AL023807.1-201ENST00000407932 359 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RN7SKP293-201ENST00000411389 296 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 OR9R1P-201ENST00000412200 877 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 OR6E1P-201ENST00000414424 923 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 EIF1P3-201ENST00000423841 334 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RPL23AP74-201ENST00000437246 471 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AP000281.1-201ENST00000444036 316 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 PPIAP20-201ENST00000449839 135 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 RN7SL72P-201ENST00000460697 269 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 PABPC1P3-201ENST00000469174 459 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC083798.1-201ENST00000472671 131 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 HMGN1P10-201ENST00000474557 553 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 SNORA70.11-201ENST00000515987 138 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 SNORA70.13-201ENST00000516116 138 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC022861.1-201ENST00000522981 663 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 BRD9P1-201ENST00000529855 560 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC007424.1-203ENST00000554613 687 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC009117.1-201ENST00000563948 554 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC034105.3-201ENST00000565294 442 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 SNORD95-201ENST00000579879 68 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC011445.2-201ENST00000599274 173 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC008966.2-201ENST00000606157 453 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AL442067.2-201ENST00000614033 363 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 AC090574.1-201ENST00000623186 233 ntBASIC5.31□□□□□ -1.56
PTCHD1Q96NR3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms