Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 MRPS31P2-201ENST00000451581 518 ntBASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 snoU109.6-201ENST00000516831 118 ntBASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.08□□□□□ -1.6
CFAP43Q8NDM7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 AL513174.1-201ENST00000423182 629 ntBASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 Y_RNA.673-201ENST00000516306 88 ntBASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 AC087888.1-201ENST00000550884 1254 ntBASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 AL390838.2-201ENST00000602394 274 ntBASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 AC112503.1-201ENST00000608436 391 ntBASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.07□□□□□ -1.6
CFAP43Q8NDM7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 AL359693.1-201ENST00000614959 2407 ntBASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 MIR30E-201ENST00000362104 92 ntBASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 AC009263.1-201ENST00000441193 1239 ntBASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 RPL23AP67-201ENST00000465341 474 ntBASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 TRBV8-2-201ENST00000475637 270 ntBASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 AP003485.2-201ENST00000623636 610 ntBASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 RIOK3P1-201ENST00000418778 1528 ntBASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CFAP43Q8NDM7 AL356968.1-201ENST00000416622 474 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 NUP35P1-201ENST00000422734 947 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AC068724.1-201ENST00000487100 792 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 RNU1-143P-201ENST00000516296 146 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AP000859.1-201ENST00000525536 307 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 EIF5A2P1-201ENST00000564027 460 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 U1.23-201ENST00000610293 146 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 RNU1-68P-201ENST00000615382 146 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 U1.39-201ENST00000621562 146 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 RNA5SP31-201ENST00000411144 127 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 ETF1P3-201ENST00000430422 1160 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 YWHAEP4-201ENST00000505390 198 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AL034351.1-201ENST00000605288 668 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 RMST_9.1-201ENST00000619945 193 ntBASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.05□□□□□ -1.6
CFAP43Q8NDM7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AC027287.1-201ENST00000553115 1453 ntBASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AC104297.1-201ENST00000393779 870 ntBASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 HMGB3P18-201ENST00000406327 590 ntBASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 EEF1A1P41-201ENST00000414667 207 ntBASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AC067852.4-201ENST00000590314 478 ntBASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 PCA3_2.1-201ENST00000612507 409 ntBASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 AL672296.1-201ENST00000427780 2158 ntBASIC5.04□□□□□ -1.6
CFAP43Q8NDM7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CFAP43Q8NDM7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.03□□□□□ -1.6
CFAP43Q8NDM7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CFAP43Q8NDM7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CFAP43Q8NDM7 GLRXP1-201ENST00000423261 334 ntBASIC5.03□□□□□ -1.6
CFAP43Q8NDM7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms