Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ELOCP11-201ENST00000436690 332 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 FABP5P3-201ENST00000437960 408 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AF228730.2-201ENST00000438784 848 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 RNF2P1-201ENST00000442955 1010 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 RPS26P30-201ENST00000443431 335 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 ELOCP16-201ENST00000444494 332 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC010683.1-201ENST00000473673 378 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC091959.2-201ENST00000477363 321 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC023824.3-201ENST00000569003 562 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC090666.1-201ENST00000578241 445 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC008507.2-201ENST00000588402 1176 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 BNIP3P27-201ENST00000599991 412 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AL109618.2-201ENST00000605527 211 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AL451086.1-201ENST00000605596 223 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC004825.2-201ENST00000616634 455 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AL049777.1-201ENST00000622740 518 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC006927.2-201ENST00000639256 389 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 NSRP1P1-201ENST00000444067 1693 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AL049737.1-201ENST00000413920 1403 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 OR4A15-201ENST00000314706 1035 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 RNU5B-4P-201ENST00000363508 111 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC234772.1-201ENST00000377927 937 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC025750.1-201ENST00000399891 379 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AL445189.1-201ENST00000405722 338 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 SNORA11C-201ENST00000408532 129 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 SNORA3.3-201ENST00000408712 125 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 RNU2-65P-201ENST00000410162 185 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 CYCSP19-201ENST00000411715 316 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 UBE2V1P9-201ENST00000414760 368 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AL031736.2-201ENST00000426573 787 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AL365396.1-201ENST00000430854 671 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 RPS7P2-201ENST00000435134 607 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC000041.1-201ENST00000439655 175 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 UBE2V1P5-201ENST00000440070 405 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC008280.2-201ENST00000455473 307 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC109458.1-201ENST00000508858 316 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC008494.2-201ENST00000514544 370 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC093853.1-201ENST00000515689 483 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC022695.1-201ENST00000522089 237 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 CYB5AP5-201ENST00000549779 389 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 OR4U1P-201ENST00000554958 912 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC090877.1-201ENST00000561418 344 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC023825.1-201ENST00000566704 1030 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC010735.1-201ENST00000567305 1026 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC107982.3-201ENST00000584957 985 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC093227.2-201ENST00000589357 285 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 MRPS35P3-201ENST00000603189 709 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC007275.1-201ENST00000621243 671 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC092608.3-201ENST00000625017 386 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AC046144.1-201ENST00000478559 1853 ntBASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf40Q8IXQ3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 MTCO1P6-201ENST00000481192 1384 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 RNU1-87P-201ENST00000363727 170 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 RPL32P23-201ENST00000397237 405 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms