Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 RPS20P24-201ENST00000457473 361 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 RN7SL826P-201ENST00000479724 288 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 RPS21P4-201ENST00000487122 248 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 MTCYBP18-201ENST00000501056 747 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 NDUFA5P12-201ENST00000503796 343 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 RN7SKP277-201ENST00000516895 283 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC123904.2-201ENST00000548059 300 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC107954.1-201ENST00000565906 727 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 RPSAP73-201ENST00000614820 330 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AP006248.2-201ENST00000623309 592 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC091905.1-201ENST00000624400 311 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC011460.1-201ENST00000636268 1834 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AC020656.2-201ENST00000613291 5309 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 AP005435.3-201ENST00000531260 3198 ntBASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPAS4Q8IUM7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL591135.1-201ENST00000401578 5914 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 RNU6-692P-201ENST00000384496 107 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MT-TD-201ENST00000387419 68 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 RNU1-77P-201ENST00000390868 162 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC005042.1-201ENST00000393397 800 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC078974.1-201ENST00000411597 223 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 RPL36AP36-201ENST00000418616 301 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC137499.1-201ENST00000427602 88 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 GEMIN8P3-201ENST00000445417 720 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC010733.1-201ENST00000451515 401 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 RPS4XP10-201ENST00000465034 731 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MTCO2P29-201ENST00000465212 189 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 CR383656.1-201ENST00000484916 377 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 RPS23P1-201ENST00000491662 432 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC097173.1-201ENST00000505862 819 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 PGAM1P13-201ENST00000507497 754 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 RNU6-358P-201ENST00000516564 75 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 Y_RNA.701-201ENST00000516812 110 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 HMGN2P6-201ENST00000551091 273 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL512360.1-201ENST00000555346 234 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MIR4700-201ENST00000578311 74 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC104687.2-201ENST00000604442 342 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms