Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 DBF4P1-201ENST00000412976 1892 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 RNU1-132P-201ENST00000364300 164 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 MIR649-201ENST00000384843 97 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 RN7SKP177-201ENST00000410567 355 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC009237.2-201ENST00000421358 284 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC114973.1-201ENST00000429057 632 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 B3GNT2P1-201ENST00000434960 952 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AL590399.6-201ENST00000446396 307 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 RPL7P19-201ENST00000469948 618 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC005798.1-201ENST00000513715 387 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 OR4C2P-201ENST00000530855 1064 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 TRAV8-5-201ENST00000537369 341 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC092747.2-201ENST00000545069 983 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 LSM6P2-201ENST00000552208 177 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 MIR4666A-201ENST00000580160 79 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 OR4G1P-201ENST00000588632 938 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 RNA5SP108-201ENST00000605921 117 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AL512506.2-201ENST00000624472 458 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AL445984.1-201ENST00000637834 659 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 MTND5P3-201ENST00000438536 1800 ntBASIC4.39□□□□□ -1.71
PRPF39Q86UA1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF39Q86UA1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AL121657.1-201ENST00000327215 531 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 MIR383-201ENST00000362257 73 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 RNU6-921P-201ENST00000384361 107 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 SNORD116-23-201ENST00000384645 92 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 SNORA57.1-201ENST00000391227 145 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 NRBF2P2-201ENST00000413087 861 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 NANOGP6-201ENST00000429190 847 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 MTATP6P14-201ENST00000455189 673 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC069528.1-202ENST00000482888 637 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 HMGB3P13-201ENST00000511263 607 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 MTATP6P9-201ENST00000515039 680 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 DEFB130C-202ENST00000530001 230 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC092470.1-201ENST00000546187 132 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AC112230.1-201ENST00000604342 547 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AL121652.1-201ENST00000608851 448 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AL592148.2-201ENST00000612210 372 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 ZYXP1-201ENST00000617638 118 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 MTCO1P24-201ENST00000515438 1558 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 AL355578.1-201ENST00000607405 1328 ntBASIC4.38□□□□□ -1.71
PRPF39Q86UA1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms