Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC020893.1-201ENST00000502452 580 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 FTH1P24-201ENST00000503502 462 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 AC010468.3-201ENST00000508225 458 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 MTCO1P30-201ENST00000515244 580 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 RN7SKP141-201ENST00000516167 338 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 OR4A2P-201ENST00000527276 913 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC011602.1-201ENST00000546484 331 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC025884.1-201ENST00000556034 378 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 AF230666.2-201ENST00000602328 725 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.43□□□□□ -1.86
RFX4Q33E94 AP001033.2-201ENST00000609701 1003 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC024023.1-201ENST00000624530 922 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.43□□□□□ -1.86
RFX4Q33E94 MIR492-201ENST00000638676 116 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RFX4Q33E94 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.42□□□□□ -1.86
RFX4Q33E94 MFSD8-236ENST00000641509 4050 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 GABPAP-201ENST00000419271 1356 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 AC126755.2-208ENST00000327792 462 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC138969.1-213ENST00000331436 462 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 RNU6-792P-201ENST00000363490 107 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 RNA5SP42-201ENST00000364278 115 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 MIR142-201ENST00000384835 87 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RFX4Q33E94 HMGB1P10-201ENST00000395823 563 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
RFX4Q33E94 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 SKINT1L-201ENST00000401057 817 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AL022722.2-201ENST00000402519 180 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 MTCO3P31-201ENST00000405526 789 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC004022.2-201ENST00000413824 193 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AL158825.1-201ENST00000414735 521 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 RPS15AP6-201ENST00000420703 385 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 AL049610.1-201ENST00000423374 372 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 NDUFB1P1-201ENST00000435191 180 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 TXNP1-201ENST00000441872 371 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC097499.1-201ENST00000444277 208 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.42□□□□□ -1.86
RFX4Q33E94 HMGN2P21-201ENST00000447764 270 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 RPL7P19-201ENST00000469948 618 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 NDUFA5P9-201ENST00000472609 340 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 RPL21P103-201ENST00000479921 488 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC092451.1-201ENST00000480211 153 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 HPRT1P1-201ENST00000509498 657 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.42□□□□□ -1.86
RFX4Q33E94 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.42□□□□□ -1.86
RFX4Q33E94 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.42□□□□□ -1.86
RFX4Q33E94 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.42□□□□□ -1.86
RFX4Q33E94 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.42□□□□□ -1.86
RFX4Q33E94 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.42□□□□□ -1.86
RFX4Q33E94 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 BNIP3P38-201ENST00000601117 544 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 SNORA62.6-201ENST00000606322 83 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 MIR6748-201ENST00000610433 71 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC105429.2-201ENST00000610567 517 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 MIR6867-201ENST00000610636 67 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AL512506.1-201ENST00000613918 449 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC079684.1-201ENST00000621405 437 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC110801.1-201ENST00000623590 212 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC112484.5-201ENST00000624189 228 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RFX4Q33E94 MIR6830-201ENST00000636015 70 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RFX4Q33E94 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 SEPT7P7-201ENST00000420492 1301 ntBASIC3.42□□□□□ -1.86
RFX4Q33E94 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX4Q33E94 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RFX4Q33E94 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFX4Q33E94 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFX4Q33E94 AC073073.2-201ENST00000609827 2578 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 RPL32P3-201ENST00000359025 275 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 SNORA70C-201ENST00000384538 135 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 PTMAP5-201ENST00000393073 333 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 MTATP6P19-201ENST00000413797 659 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX4Q33E94 TCEA1P4-201ENST00000415066 844 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX4Q33E94 MTND2P15-201ENST00000418575 892 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms