Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MIR2276-201ENST00000516886 89 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXF1Q12946 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXF1Q12946 AP000619.3-201ENST00000535634 1127 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXF1Q12946 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXF1Q12946 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXF1Q12946 MIR4276-201ENST00000584832 70 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXF1Q12946 AC022146.1-201ENST00000595307 847 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC123786.2-201ENST00000603459 275 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC010680.3-201ENST00000604215 520 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 MIR92B-201ENST00000607575 96 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC110801.1-201ENST00000623590 212 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXF1Q12946 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXF1Q12946 AC009313.2-201ENST00000417893 1941 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
FOXF1Q12946 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
FOXF1Q12946 AL049781.1-201ENST00000623195 3585 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXF1Q12946 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXF1Q12946 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXF1Q12946 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
FOXF1Q12946 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
FOXF1Q12946 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
FOXF1Q12946 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
FOXF1Q12946 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
FOXF1Q12946 MIR30E-201ENST00000362104 92 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 SNORD6-201ENST00000365444 73 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 RNA5SP171-201ENST00000391071 115 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AL356968.1-201ENST00000416622 474 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 RPS12P23-201ENST00000419579 400 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 FTH1P6-201ENST00000430768 320 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXF1Q12946 RPL6P5-201ENST00000445678 828 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC113398.2-201ENST00000507630 558 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC025260.1-201ENST00000548858 430 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC084757.1-201ENST00000559987 490 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXF1Q12946 RN7SL339P-201ENST00000580597 296 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXF1Q12946 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC034236.3-201ENST00000605999 461 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC007620.3-201ENST00000608131 497 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC019131.2-201ENST00000609071 870 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC019176.2-201ENST00000611579 315 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 AC116447.1-201ENST00000613153 453 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 MIR6075-201ENST00000620782 95 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
FOXF1Q12946 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
FOXF1Q12946 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXF1Q12946 MTCO1P14-201ENST00000441695 1559 ntBASIC3.04□□□□□ -1.92
FOXF1Q12946 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
FOXF1Q12946 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXF1Q12946 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXF1Q12946 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXF1Q12946 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXF1Q12946 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXF1Q12946 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
FOXF1Q12946 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXF1Q12946 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXF1Q12946 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
FOXF1Q12946 AP002088.1-201ENST00000382740 395 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 RNU6-225P-201ENST00000384613 103 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 MIR7-3-201ENST00000384898 110 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXF1Q12946 RPS7P15-201ENST00000415804 584 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 LIPT1P1-201ENST00000415870 1186 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXF1Q12946 OR1AA1P-201ENST00000419597 916 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 RPS15AP6-201ENST00000420703 385 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXF1Q12946 AC005019.1-201ENST00000436455 431 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 PRDX3P3-201ENST00000447765 522 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AL358232.1-201ENST00000448030 501 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 OR6C72P-201ENST00000451403 892 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 RPL12P26-201ENST00000452430 487 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXF1Q12946 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXF1Q12946 RPS4XP10-201ENST00000465034 731 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 RPL6P9-201ENST00000466502 859 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXF1Q12946 AC073522.1-201ENST00000483312 377 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 RPL7P38-201ENST00000488396 739 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.03□□□□□ -1.92
FOXF1Q12946 HMGB1P21-201ENST00000502313 581 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms