Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC090543.2-201ENST00000483963 348 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC004057.1-201ENST00000485827 348 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.27□□□□□ -1.73
GABPAQ06546 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.27□□□□□ -1.73
GABPAQ06546 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.27□□□□□ -1.73
GABPAQ06546 AC109458.1-201ENST00000508858 316 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.27□□□□□ -1.73
GABPAQ06546 HNRNPKP5-201ENST00000515300 253 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.27□□□□□ -1.73
GABPAQ06546 AC113192.3-201ENST00000529152 742 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC103843.2-201ENST00000530523 682 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
GABPAQ06546 AC023161.2-201ENST00000551218 780 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.27□□□□□ -1.73
GABPAQ06546 AC007179.3-201ENST00000604976 235 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC011374.2-201ENST00000607135 526 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC243654.2-201ENST00000612843 443 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC084757.4-201ENST00000616350 526 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AL158196.1-201ENST00000616786 434 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AL732618.1-201ENST00000623251 301 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC116563.2-201ENST00000624751 535 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AP000720.1-201ENST00000625091 483 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
GABPAQ06546 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
GABPAQ06546 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GABPAQ06546 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GABPAQ06546 AC090337.1-201ENST00000579651 2074 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GABPAQ06546 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
GABPAQ06546 MIR34B-201ENST00000385076 84 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 PTMAP5-201ENST00000393073 333 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AL590290.1-201ENST00000405336 380 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 UBE2V1P11-201ENST00000411559 285 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 VTA1P1-201ENST00000414044 866 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.26□□□□□ -1.73
GABPAQ06546 HMGB3P20-201ENST00000417997 600 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GABPAQ06546 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.26□□□□□ -1.73
GABPAQ06546 IPMKP1-201ENST00000425988 855 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.26□□□□□ -1.73
GABPAQ06546 NPM1P24-201ENST00000428039 894 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.26□□□□□ -1.73
GABPAQ06546 RPL21P110-201ENST00000433345 446 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC073063.1-201ENST00000434352 607 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.26□□□□□ -1.73
GABPAQ06546 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.26□□□□□ -1.73
GABPAQ06546 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.26□□□□□ -1.73
GABPAQ06546 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.26□□□□□ -1.73
GABPAQ06546 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.26□□□□□ -1.73
GABPAQ06546 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.26□□□□□ -1.73
GABPAQ06546 RPL7P55-201ENST00000450522 746 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC008155.2-201ENST00000464337 397 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 PLGLA-201ENST00000465668 449 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 MTCO2P9-201ENST00000503214 694 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.26□□□□□ -1.73
GABPAQ06546 RN7SKP209-201ENST00000516888 304 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.26□□□□□ -1.73
GABPAQ06546 AL121766.1-201ENST00000547436 487 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.26□□□□□ -1.73
GABPAQ06546 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.26□□□□□ -1.73
GABPAQ06546 AL121594.4-201ENST00000556211 1196 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC018552.3-201ENST00000567416 561 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 SRGNP1-201ENST00000603392 451 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC069209.1-201ENST00000619282 651 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC091905.1-201ENST00000624400 311 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 AC083865.1-201ENST00000636634 831 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.26□□□□□ -1.73
GABPAQ06546 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.26□□□□□ -1.73
GABPAQ06546 MTCO1P12-201ENST00000414273 1543 ntBASIC4.26□□□□□ -1.73
GABPAQ06546 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
GABPAQ06546 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.25□□□□□ -1.73
GABPAQ06546 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.25□□□□□ -1.73
GABPAQ06546 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GABPAQ06546 AL158825.1-201ENST00000414735 521 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AL158050.1-201ENST00000416077 457 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 MTCO2P1-201ENST00000424648 477 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AC009965.2-201ENST00000425328 970 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 UBE2D3P3-201ENST00000426992 425 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.25□□□□□ -1.73
GABPAQ06546 TPTE2P6-202ENST00000445572 1007 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 YWHAQP9-201ENST00000445891 512 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 PPIAP3-201ENST00000450588 505 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AC099563.1-201ENST00000456086 418 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.25□□□□□ -1.73
GABPAQ06546 CCDC75P1-201ENST00000469247 791 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.25□□□□□ -1.73
GABPAQ06546 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.25□□□□□ -1.73
GABPAQ06546 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.25□□□□□ -1.73
GABPAQ06546 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.25□□□□□ -1.73
GABPAQ06546 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.25□□□□□ -1.73
GABPAQ06546 OR1AB1P-201ENST00000585564 761 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AC015911.5-201ENST00000587076 451 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AC012254.4-201ENST00000588843 273 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.25□□□□□ -1.73
GABPAQ06546 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.25□□□□□ -1.73
GABPAQ06546 MIR8084-201ENST00000614105 89 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms