Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SUMO2P20-201ENST00000520803 283 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AC090281.1-201ENST00000523019 276 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 AC141257.3-201ENST00000572906 215 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.58□□□□□ -1.84
LIM2P55344 AC087499.8-201ENST00000578406 226 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.58□□□□□ -1.84
LIM2P55344 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 AC115621.1-201ENST00000604653 858 ntBASIC3.58□□□□□ -1.84
LIM2P55344 SNORA62.6-201ENST00000606322 83 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AC016542.1-201ENST00000608259 493 ntBASIC3.58□□□□□ -1.84
LIM2P55344 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.58□□□□□ -1.84
LIM2P55344 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 AC005344.1-201ENST00000613391 459 ntBASIC3.58□□□□□ -1.84
LIM2P55344 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 AC091905.1-201ENST00000624400 311 ntBASIC3.58□□□□□ -1.84
LIM2P55344 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 AP004289.2-201ENST00000444413 1457 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AL592494.2-201ENST00000425455 1548 ntBASIC3.58□□□□□ -1.84
LIM2P55344 SAGE4P-201ENST00000442271 3381 ntBASIC3.58□□□□□ -1.84
LIM2P55344 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 AC025125.1-201ENST00000624743 1922 ntBASIC3.58□□□□□ -1.84
LIM2P55344 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 AL031985.3-201ENST00000565390 2449 ntBASIC3.58□□□□□ -1.84
LIM2P55344 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIM2P55344 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LIM2P55344 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.57□□□□□ -1.84
LIM2P55344 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LIM2P55344 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIM2P55344 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LIM2P55344 RPL32P23-201ENST00000397237 405 ntBASIC3.57□□□□□ -1.84
LIM2P55344 RN7SKP156-201ENST00000410308 342 ntBASIC3.57□□□□□ -1.84
LIM2P55344 UBE2V1P9-201ENST00000414760 368 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.57□□□□□ -1.84
LIM2P55344 DEFB130D-201ENST00000426866 237 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AL591419.1-201ENST00000427423 339 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.57□□□□□ -1.84
LIM2P55344 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.57□□□□□ -1.84
LIM2P55344 RPS26P40-201ENST00000435209 294 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.57□□□□□ -1.84
LIM2P55344 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.57□□□□□ -1.84
LIM2P55344 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.57□□□□□ -1.84
LIM2P55344 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.57□□□□□ -1.84
LIM2P55344 RPS20P21-201ENST00000466859 343 ntBASIC3.57□□□□□ -1.84
LIM2P55344 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LIM2P55344 AC008885.2-201ENST00000509506 930 ntBASIC3.57□□□□□ -1.84
LIM2P55344 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.57□□□□□ -1.84
LIM2P55344 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LIM2P55344 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.57□□□□□ -1.84
LIM2P55344 AP003355.1-201ENST00000518956 587 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.57□□□□□ -1.84
LIM2P55344 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.57□□□□□ -1.84
LIM2P55344 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.57□□□□□ -1.84
LIM2P55344 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LIM2P55344 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.57□□□□□ -1.84
LIM2P55344 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.57□□□□□ -1.84
LIM2P55344 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.57□□□□□ -1.84
LIM2P55344 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.57□□□□□ -1.84
LIM2P55344 AC107982.3-201ENST00000584957 985 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AC006116.7-201ENST00000590141 756 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.57□□□□□ -1.84
LIM2P55344 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.57□□□□□ -1.84
LIM2P55344 AP003117.1-201ENST00000602771 554 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AL451086.1-201ENST00000605596 223 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AC078880.5-201ENST00000617845 421 ntBASIC3.57□□□□□ -1.84
LIM2P55344 MIR6864-201ENST00000617935 70 ntBASIC3.57□□□□□ -1.84
LIM2P55344 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.57□□□□□ -1.84
LIM2P55344 AC000123.2-201ENST00000623124 461 ntBASIC3.57□□□□□ -1.84
LIM2P55344 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.57□□□□□ -1.84
LIM2P55344 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIM2P55344 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LIM2P55344 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIM2P55344 XPOTP1-201ENST00000443317 2398 ntBASIC3.56□□□□□ -1.84
LIM2P55344 AC024560.2-201ENST00000507981 1497 ntBASIC3.56□□□□□ -1.84
LIM2P55344 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LIM2P55344 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LIM2P55344 OR4A15-201ENST00000314706 1035 ntBASIC3.56□□□□□ -1.84
LIM2P55344 RNU6-207P-201ENST00000384137 107 ntBASIC3.56□□□□□ -1.84
LIM2P55344 MIR525-201ENST00000384978 85 ntBASIC3.56□□□□□ -1.84
LIM2P55344 RPL22P22-201ENST00000395439 379 ntBASIC3.56□□□□□ -1.84
LIM2P55344 HSPE1P8-201ENST00000406997 288 ntBASIC3.56□□□□□ -1.84
LIM2P55344 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.56□□□□□ -1.84
LIM2P55344 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.56□□□□□ -1.84
LIM2P55344 HIGD1AP12-201ENST00000427832 281 ntBASIC3.56□□□□□ -1.84
LIM2P55344 OR4F13P-201ENST00000428478 931 ntBASIC3.56□□□□□ -1.84
LIM2P55344 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.56□□□□□ -1.84
LIM2P55344 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.56□□□□□ -1.84
LIM2P55344 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.56□□□□□ -1.84
LIM2P55344 SETD6P1-201ENST00000444575 317 ntBASIC3.56□□□□□ -1.84
LIM2P55344 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.56□□□□□ -1.84
LIM2P55344 AC008280.2-201ENST00000455473 307 ntBASIC3.56□□□□□ -1.84
LIM2P55344 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.56□□□□□ -1.84
LIM2P55344 AC010307.1-201ENST00000467206 836 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms