Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL592221.1-201ENST00000605266 382 ntBASIC4.83□□□□□ -1.64
COPB1P53618 AC008121.2-201ENST00000614647 523 ntBASIC4.83□□□□□ -1.64
COPB1P53618 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.83□□□□□ -1.64
COPB1P53618 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COPB1P53618 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
COPB1P53618 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
COPB1P53618 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COPB1P53618 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COPB1P53618 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.83□□□□□ -1.64
COPB1P53618 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COPB1P53618 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COPB1P53618 AL390237.1-201ENST00000404226 1415 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC109315.1-201ENST00000584143 1347 ntBASIC4.82□□□□□ -1.64
COPB1P53618 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COPB1P53618 HMGB1P5-201ENST00000255320 642 ntBASIC4.82□□□□□ -1.64
COPB1P53618 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COPB1P53618 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.82□□□□□ -1.64
COPB1P53618 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COPB1P53618 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AL161449.1-201ENST00000414531 1199 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AL031779.1-201ENST00000415663 330 ntBASIC4.82□□□□□ -1.64
COPB1P53618 RPS23P10-201ENST00000416185 486 ntBASIC4.82□□□□□ -1.64
COPB1P53618 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.82□□□□□ -1.64
COPB1P53618 P2RY10P2-201ENST00000416730 913 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 DPRXP1-201ENST00000426312 460 ntBASIC4.82□□□□□ -1.64
COPB1P53618 Z93242.1-201ENST00000427102 353 ntBASIC4.82□□□□□ -1.64
COPB1P53618 RPL21P110-201ENST00000433345 446 ntBASIC4.82□□□□□ -1.64
COPB1P53618 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC093155.1-201ENST00000440164 826 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.82□□□□□ -1.64
COPB1P53618 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.82□□□□□ -1.64
COPB1P53618 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COPB1P53618 NDUFA12P1-201ENST00000455914 406 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.82□□□□□ -1.64
COPB1P53618 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COPB1P53618 RPL12P20-201ENST00000475538 479 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AL161747.1-201ENST00000480068 358 ntBASIC4.82□□□□□ -1.64
COPB1P53618 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 VPS26AP1-201ENST00000483197 979 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.82□□□□□ -1.64
COPB1P53618 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.82□□□□□ -1.64
COPB1P53618 AC006499.6-201ENST00000511169 607 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC109445.1-201ENST00000512356 383 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.82□□□□□ -1.64
COPB1P53618 AC108471.1-201ENST00000513977 287 ntBASIC4.82□□□□□ -1.64
COPB1P53618 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.82□□□□□ -1.64
COPB1P53618 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
COPB1P53618 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.82□□□□□ -1.64
COPB1P53618 AC069240.1-201ENST00000548774 375 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC023161.2-201ENST00000551218 780 ntBASIC4.82□□□□□ -1.64
COPB1P53618 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.82□□□□□ -1.64
COPB1P53618 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.82□□□□□ -1.64
COPB1P53618 BPTFP1-201ENST00000579209 492 ntBASIC4.82□□□□□ -1.64
COPB1P53618 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.82□□□□□ -1.64
COPB1P53618 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.82□□□□□ -1.64
COPB1P53618 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 AC131235.4-201ENST00000609288 620 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC019278.1-201ENST00000623516 479 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC098679.5-201ENST00000624394 571 ntBASIC4.82□□□□□ -1.64
COPB1P53618 AC007494.3-201ENST00000624660 743 ntBASIC4.82□□□□□ -1.64
COPB1P53618 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COPB1P53618 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COPB1P53618 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.82□□□□□ -1.64
COPB1P53618 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPB1P53618 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPB1P53618 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPB1P53618 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COPB1P53618 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COPB1P53618 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPB1P53618 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COPB1P53618 Y_RNA.194-201ENST00000363985 102 ntBASIC4.81□□□□□ -1.64
COPB1P53618 RNU6-621P-201ENST00000364752 109 ntBASIC4.81□□□□□ -1.64
COPB1P53618 SNORD66.1-201ENST00000391230 76 ntBASIC4.81□□□□□ -1.64
COPB1P53618 RNA5SP397-201ENST00000391323 118 ntBASIC4.81□□□□□ -1.64
COPB1P53618 GLULP6-201ENST00000399502 913 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AL049697.2-201ENST00000403708 294 ntBASIC4.81□□□□□ -1.64
COPB1P53618 RPS16P5-201ENST00000406501 404 ntBASIC4.81□□□□□ -1.64
COPB1P53618 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 RN7SKP106-201ENST00000410832 272 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 SNRPFP1-201ENST00000414761 252 ntBASIC4.81□□□□□ -1.64
COPB1P53618 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.81□□□□□ -1.64
COPB1P53618 DNAJC19P7-201ENST00000428811 344 ntBASIC4.81□□□□□ -1.64
COPB1P53618 SEPT7P5-201ENST00000434048 306 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC129850.1-201ENST00000436203 508 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AL591503.2-201ENST00000442314 1005 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 AL360221.1-201ENST00000445989 335 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AL035551.1-201ENST00000446931 348 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms