Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RPL7P6-201ENST00000480903 738 ntBASIC6.11□□□□□ -1.43
USP11P51784 RPL7P39-201ENST00000481157 744 ntBASIC6.11□□□□□ -1.43
USP11P51784 MTND1P3-201ENST00000484956 952 ntBASIC6.11□□□□□ -1.43
USP11P51784 RPS21P4-201ENST00000487122 248 ntBASIC6.11□□□□□ -1.43
USP11P51784 AC093278.1-201ENST00000494700 600 ntBASIC6.11□□□□□ -1.43
USP11P51784 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.11□□□□□ -1.43
USP11P51784 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.11□□□□□ -1.43
USP11P51784 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.11□□□□□ -1.43
USP11P51784 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.11□□□□□ -1.43
USP11P51784 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP11P51784 AL049779.2-201ENST00000553847 315 ntBASIC6.11□□□□□ -1.43
USP11P51784 MIR4489-201ENST00000578869 62 ntBASIC6.11□□□□□ -1.43
USP11P51784 HMGN1P30-201ENST00000589286 268 ntBASIC6.11□□□□□ -1.43
USP11P51784 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.11□□□□□ -1.43
USP11P51784 AC244107.2-201ENST00000611773 76 ntBASIC6.11□□□□□ -1.43
USP11P51784 AC234782.5-201ENST00000617723 324 ntBASIC6.11□□□□□ -1.43
USP11P51784 AC090527.3-201ENST00000619041 548 ntBASIC6.11□□□□□ -1.43
USP11P51784 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
USP11P51784 AC119674.1-212ENST00000641155 993 ntBASIC6.11□□□□□ -1.43
USP11P51784 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP11P51784 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.11□□□□□ -1.43
USP11P51784 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
USP11P51784 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
USP11P51784 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.11□□□□□ -1.43
USP11P51784 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP11P51784 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
USP11P51784 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.11□□□□□ -1.43
USP11P51784 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP11P51784 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USP11P51784 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 AL078621.3-201ENST00000623707 2042 ntBASIC6.1□□□□□ -1.43
USP11P51784 OR4K12P-201ENST00000406538 961 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC093655.2-201ENST00000425735 631 ntBASIC6.1□□□□□ -1.43
USP11P51784 AL158073.1-201ENST00000426848 1104 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 TXNP5-201ENST00000441043 315 ntBASIC6.1□□□□□ -1.43
USP11P51784 RPL31P44-201ENST00000447680 377 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC108463.1-201ENST00000450258 347 ntBASIC6.1□□□□□ -1.43
USP11P51784 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.1□□□□□ -1.43
USP11P51784 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.1□□□□□ -1.43
USP11P51784 Z82190.1-201ENST00000454534 490 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC021205.1-201ENST00000468797 348 ntBASIC6.1□□□□□ -1.43
USP11P51784 AP000797.2-201ENST00000475768 606 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC058823.1-201ENST00000485315 474 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC104687.1-201ENST00000485829 412 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.1□□□□□ -1.43
USP11P51784 AC110792.2-201ENST00000510278 224 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.1□□□□□ -1.43
USP11P51784 RNU6-583P-201ENST00000516012 92 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.1□□□□□ -1.43
USP11P51784 AC027308.1-201ENST00000517993 110 ntBASIC6.1□□□□□ -1.43
USP11P51784 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.1□□□□□ -1.43
USP11P51784 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.1□□□□□ -1.43
USP11P51784 AC011611.1-201ENST00000552179 197 ntBASIC6.1□□□□□ -1.43
USP11P51784 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 AL845331.3-202ENST00000562856 261 ntBASIC6.1□□□□□ -1.43
USP11P51784 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.1□□□□□ -1.43
USP11P51784 MIR548Y-201ENST00000582739 110 ntBASIC6.1□□□□□ -1.43
USP11P51784 MIR4443-201ENST00000585052 53 ntBASIC6.1□□□□□ -1.43
USP11P51784 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 AC006363.1-201ENST00000603806 463 ntBASIC6.1□□□□□ -1.43
USP11P51784 AC007621.1-201ENST00000604544 437 ntBASIC6.1□□□□□ -1.43
USP11P51784 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 MTND5P3-201ENST00000438536 1800 ntBASIC6.1□□□□□ -1.43
USP11P51784 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP11P51784 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP11P51784 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP11P51784 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 AC092162.3-201ENST00000624511 1624 ntBASIC6.1□□□□□ -1.43
USP11P51784 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP11P51784 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP11P51784 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
USP11P51784 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
USP11P51784 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
USP11P51784 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 HSPA8P14-201ENST00000552265 1805 ntBASIC6.09□□□□□ -1.43
USP11P51784 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.09□□□□□ -1.43
USP11P51784 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.09□□□□□ -1.43
USP11P51784 Y_RNA.431-201ENST00000384086 102 ntBASIC6.09□□□□□ -1.43
USP11P51784 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.09□□□□□ -1.43
USP11P51784 RNA5SP118-201ENST00000410385 109 ntBASIC6.09□□□□□ -1.43
USP11P51784 OR9R1P-201ENST00000412200 877 ntBASIC6.09□□□□□ -1.43
USP11P51784 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.09□□□□□ -1.43
USP11P51784 AC234781.4-201ENST00000419384 244 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms