Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNORA51.12-201ENST00000384448 134 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CX3CR1P49238 HSPE1P8-201ENST00000406997 288 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 RNA5SP317-201ENST00000410176 116 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 RNU2-37P-201ENST00000410695 177 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 RNA5SP311-201ENST00000411290 116 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AC016769.2-201ENST00000414815 475 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CR1P49238 BTBD7P2-201ENST00000441962 620 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.34□□□□□ -1.87
CX3CR1P49238 AC233982.1-201ENST00000451247 436 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.34□□□□□ -1.87
CX3CR1P49238 ANP32BP2-201ENST00000454525 545 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 RPS23P7-201ENST00000466210 444 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 NPM1P17-201ENST00000479221 602 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 NCOR1P1-202ENST00000486162 291 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CR1P49238 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.34□□□□□ -1.87
CX3CR1P49238 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.34□□□□□ -1.87
CX3CR1P49238 RNA5SP315-201ENST00000516340 116 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 RNA5SP312-201ENST00000517068 116 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AC008802.1-201ENST00000519121 791 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.34□□□□□ -1.87
CX3CR1P49238 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.34□□□□□ -1.87
CX3CR1P49238 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.34□□□□□ -1.87
CX3CR1P49238 MIR4504-201ENST00000577413 92 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CR1P49238 AC008687.2-201ENST00000597865 520 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AF230666.2-201ENST00000602328 725 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AC015726.1-201ENST00000602353 681 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AC091488.1-201ENST00000604239 660 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AL390816.3-201ENST00000604527 1066 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AL354760.1-201ENST00000608357 643 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CX3CR1P49238 AP003400.6-201ENST00000624698 740 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AF001550.2-201ENST00000636643 217 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 SEPT7P7-201ENST00000420492 1301 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 AC046144.1-201ENST00000478559 1853 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CR1P49238 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CX3CR1P49238 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CX3CR1P49238 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.34□□□□□ -1.88
CX3CR1P49238 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.34□□□□□ -1.88
CX3CR1P49238 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 SEC63P2-201ENST00000503863 1939 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CR1P49238 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 DSTNP4-201ENST00000399472 474 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AL049693.1-201ENST00000402760 611 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CR1P49238 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CR1P49238 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 RPL21P109-201ENST00000422213 475 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AC073310.1-201ENST00000423226 1033 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AC005517.2-201ENST00000424673 553 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 RPL36P19-201ENST00000430744 301 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 UBE2V1P1-201ENST00000430836 445 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 BMS1P19-201ENST00000433925 393 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 Z74696.2-201ENST00000436514 498 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 RPL6P5-201ENST00000445678 828 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.33□□□□□ -1.88
CX3CR1P49238 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC114755.5-201ENST00000447760 831 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AL500527.1-201ENST00000448532 255 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CR1P49238 DNAJC19P8-201ENST00000452887 259 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AL035407.2-201ENST00000454090 378 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC023141.12-201ENST00000512399 199 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AC133963.2-201ENST00000513686 578 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 RNA5SP208-201ENST00000516156 78 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 SNORA70.14-201ENST00000516205 110 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 RN7SKP209-201ENST00000516888 304 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 RNU6-1231P-201ENST00000517185 103 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AC022695.1-201ENST00000522089 237 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CR1P49238 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC012254.4-201ENST00000588843 273 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.33□□□□□ -1.88
CX3CR1P49238 AL354696.1-201ENST00000614652 497 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CR1P49238 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 AC026951.1-201ENST00000559530 2459 ntBASIC3.33□□□□□ -1.88
CX3CR1P49238 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CR1P49238 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
CX3CR1P49238 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CR1P49238 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC107081.3-201ENST00000612715 2034 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms