Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC4P35249 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC4P35249 RPL23AP57-201ENST00000332361 466 ntBASIC4.44□□□□□ -1.7
RFC4P35249 RHOT1P2-201ENST00000366423 333 ntBASIC4.44□□□□□ -1.7
RFC4P35249 MTHFD2P2-201ENST00000407725 247 ntBASIC4.44□□□□□ -1.7
RFC4P35249 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.44□□□□□ -1.7
RFC4P35249 OR2X1P-201ENST00000421144 687 ntBASIC4.44□□□□□ -1.7
RFC4P35249 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.44□□□□□ -1.7
RFC4P35249 AC011742.1-201ENST00000431448 434 ntBASIC4.44□□□□□ -1.7
RFC4P35249 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC4P35249 ELOCP8-201ENST00000439309 332 ntBASIC4.44□□□□□ -1.7
RFC4P35249 TPTE2P3-201ENST00000441562 1189 ntBASIC4.44□□□□□ -1.7
RFC4P35249 ELOCP15-201ENST00000442090 332 ntBASIC4.44□□□□□ -1.7
RFC4P35249 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC4P35249 HMGN1P8-201ENST00000463578 288 ntBASIC4.44□□□□□ -1.7
RFC4P35249 RPS3AP14-201ENST00000483907 780 ntBASIC4.44□□□□□ -1.7
RFC4P35249 LARP7P3-201ENST00000579888 337 ntBASIC4.44□□□□□ -1.7
RFC4P35249 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.44□□□□□ -1.7
RFC4P35249 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC4P35249 AL162274.2-201ENST00000614406 332 ntBASIC4.44□□□□□ -1.7
RFC4P35249 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC4P35249 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC4P35249 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC4P35249 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC4P35249 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RFC4P35249 AL645937.1-201ENST00000641739 1652 ntBASIC4.44□□□□□ -1.7
RFC4P35249 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
RFC4P35249 AC119744.1-201ENST00000454746 1715 ntBASIC4.43□□□□□ -1.7
RFC4P35249 SAGE2P-201ENST00000420011 2126 ntBASIC4.43□□□□□ -1.7
RFC4P35249 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC4P35249 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC4P35249 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC4P35249 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC4P35249 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
RFC4P35249 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFC4P35249 MIR1289-1-201ENST00000408836 144 ntBASIC4.43□□□□□ -1.7
RFC4P35249 RNA5SP306-201ENST00000411087 107 ntBASIC4.43□□□□□ -1.7
RFC4P35249 RNA5SP498-201ENST00000411342 120 ntBASIC4.43□□□□□ -1.7
RFC4P35249 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC4P35249 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC4P35249 SDCBPP2-201ENST00000424643 885 ntBASIC4.43□□□□□ -1.7
RFC4P35249 OSTCP5-201ENST00000425293 453 ntBASIC4.43□□□□□ -1.7
RFC4P35249 ELOCP18-201ENST00000434209 337 ntBASIC4.43□□□□□ -1.7
RFC4P35249 NDUFB1P1-201ENST00000435191 180 ntBASIC4.43□□□□□ -1.7
RFC4P35249 S100A11P2-201ENST00000467589 312 ntBASIC4.43□□□□□ -1.7
RFC4P35249 TMED11P-201ENST00000479478 690 ntBASIC4.43□□□□□ -1.7
RFC4P35249 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC4P35249 MTND3P6-201ENST00000485242 339 ntBASIC4.43□□□□□ -1.7
RFC4P35249 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC4P35249 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC4P35249 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
RFC4P35249 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC4P35249 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC4P35249 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC4P35249 AL133247.2-201ENST00000603236 482 ntBASIC4.43□□□□□ -1.7
RFC4P35249 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC4P35249 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC4P35249 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFC4P35249 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC4P35249 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC4P35249 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC4P35249 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFC4P35249 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC4P35249 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC4P35249 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
RFC4P35249 AL139811.1-201ENST00000424779 2299 ntBASIC4.42□□□□□ -1.7
RFC4P35249 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.42□□□□□ -1.7
RFC4P35249 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC4P35249 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC4P35249 AC007656.2-201ENST00000624902 4547 ntBASIC4.42□□□□□ -1.7
RFC4P35249 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RFC4P35249 RNA5SP502-201ENST00000362694 119 ntBASIC4.42□□□□□ -1.7
RFC4P35249 U3.15-201ENST00000365398 212 ntBASIC4.42□□□□□ -1.7
RFC4P35249 MIR93-201ENST00000385024 80 ntBASIC4.42□□□□□ -1.7
RFC4P35249 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.42□□□□□ -1.7
RFC4P35249 VN1R48P-201ENST00000448149 1036 ntBASIC4.42□□□□□ -1.7
RFC4P35249 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC4P35249 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC4P35249 AC020893.1-201ENST00000502452 580 ntBASIC4.42□□□□□ -1.7
RFC4P35249 VWA8P1-201ENST00000510889 176 ntBASIC4.42□□□□□ -1.7
RFC4P35249 AC018797.3-201ENST00000513388 1241 ntBASIC4.42□□□□□ -1.7
RFC4P35249 Vault.1-201ENST00000516474 102 ntBASIC4.42□□□□□ -1.7
RFC4P35249 RNU6-551P-201ENST00000516661 103 ntBASIC4.42□□□□□ -1.7
RFC4P35249 MIR5004-201ENST00000579078 107 ntBASIC4.42□□□□□ -1.7
RFC4P35249 AL451007.1-201ENST00000595491 289 ntBASIC4.42□□□□□ -1.7
RFC4P35249 ABI1P1-201ENST00000603375 1120 ntBASIC4.42□□□□□ -1.7
RFC4P35249 RPL23AP61-201ENST00000623642 466 ntBASIC4.42□□□□□ -1.7
RFC4P35249 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC4P35249 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC4P35249 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC4P35249 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC4P35249 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC4P35249 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFC4P35249 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.41□□□□□ -1.7
RFC4P35249 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFC4P35249 RNU4-23P-201ENST00000362839 140 ntBASIC4.41□□□□□ -1.7
RFC4P35249 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFC4P35249 RN7SKP53-201ENST00000411337 315 ntBASIC4.41□□□□□ -1.7
RFC4P35249 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC4P35249 COTL1P1-201ENST00000422309 375 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms