Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL121878.1-201ENST00000418638 859 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.8□□□□□ -1.64
TM4SF1P30408 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.8□□□□□ -1.64
TM4SF1P30408 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.8□□□□□ -1.64
TM4SF1P30408 RANP8-201ENST00000444720 713 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM4SF1P30408 AC115115.1-201ENST00000449927 248 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 SUMO2P5-201ENST00000506790 245 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 AC119751.1-201ENST00000513357 765 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 RN7SKP57-201ENST00000517248 293 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.8□□□□□ -1.64
TM4SF1P30408 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.8□□□□□ -1.64
TM4SF1P30408 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.8□□□□□ -1.64
TM4SF1P30408 OR4A12P-201ENST00000530847 918 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.8□□□□□ -1.64
TM4SF1P30408 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.8□□□□□ -1.64
TM4SF1P30408 AC068446.3-201ENST00000555285 382 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.8□□□□□ -1.64
TM4SF1P30408 AC084757.1-201ENST00000559987 490 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.8□□□□□ -1.64
TM4SF1P30408 MIR3936-201ENST00000584304 110 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 VN1R74P-201ENST00000613259 503 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 AC009269.6-201ENST00000621778 588 ntBASIC4.8□□□□□ -1.64
TM4SF1P30408 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.8□□□□□ -1.64
TM4SF1P30408 DDX18P3-201ENST00000404856 2007 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TM4SF1P30408 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 RNU6-236P-201ENST00000363886 106 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 HNRNPDP2-201ENST00000406475 478 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 MIR1251-201ENST00000408552 70 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.79□□□□□ -1.64
TM4SF1P30408 AC092447.2-201ENST00000435487 669 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.79□□□□□ -1.64
TM4SF1P30408 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.79□□□□□ -1.64
TM4SF1P30408 RPS3AP46-201ENST00000448352 682 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AC233982.1-201ENST00000451247 436 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 RPS4XP10-201ENST00000465034 731 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.79□□□□□ -1.64
TM4SF1P30408 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.79□□□□□ -1.64
TM4SF1P30408 AC073522.1-201ENST00000483312 377 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.79□□□□□ -1.64
TM4SF1P30408 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.79□□□□□ -1.64
TM4SF1P30408 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.79□□□□□ -1.64
TM4SF1P30408 AC069306.1-201ENST00000507006 843 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.79□□□□□ -1.64
TM4SF1P30408 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.79□□□□□ -1.64
TM4SF1P30408 IGJP1-201ENST00000522682 475 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AC022790.1-201ENST00000522872 204 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.79□□□□□ -1.64
TM4SF1P30408 SERPINE4P-201ENST00000554978 281 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.79□□□□□ -1.64
TM4SF1P30408 OR1AB1P-201ENST00000585564 761 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AP001542.2-201ENST00000593141 364 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AC013468.1-201ENST00000608680 598 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AL031666.3-201ENST00000609320 1006 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.79□□□□□ -1.64
TM4SF1P30408 AC099654.9-201ENST00000637055 678 ntBASIC4.79□□□□□ -1.64
TM4SF1P30408 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.79□□□□□ -1.64
TM4SF1P30408 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM4SF1P30408 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 TAF13P2-201ENST00000416876 286 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.78□□□□□ -1.64
TM4SF1P30408 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AL450263.2-201ENST00000439400 589 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 GEMIN8P3-201ENST00000445417 720 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.78□□□□□ -1.64
TM4SF1P30408 MRPL35P4-201ENST00000453682 566 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC096992.1-201ENST00000459808 709 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 RPS29P2-201ENST00000479278 136 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC006517.1-201ENST00000480485 328 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.78□□□□□ -1.64
TM4SF1P30408 RNA5SP164-201ENST00000516533 110 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 RN7SKP96-201ENST00000516948 297 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.78□□□□□ -1.64
TM4SF1P30408 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.78□□□□□ -1.64
TM4SF1P30408 LRRC6P1-201ENST00000532188 885 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.78□□□□□ -1.64
TM4SF1P30408 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms