Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
CASP1P29466 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
CASP1P29466 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CASP1P29466 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.55□□□□□ -1.84
CASP1P29466 SNORA62.2-201ENST00000364672 152 ntBASIC3.55□□□□□ -1.84
CASP1P29466 NCSTNP1-201ENST00000406229 144 ntBASIC3.55□□□□□ -1.84
CASP1P29466 RNA5SP293-201ENST00000410527 113 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.55□□□□□ -1.84
CASP1P29466 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.55□□□□□ -1.84
CASP1P29466 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CASP1P29466 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.55□□□□□ -1.84
CASP1P29466 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
CASP1P29466 UBE2V2P4-201ENST00000447495 259 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AC125238.1-201ENST00000448842 249 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.55□□□□□ -1.84
CASP1P29466 MTND6P32-201ENST00000457611 483 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AC073522.1-201ENST00000483312 377 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AC114967.1-201ENST00000504890 259 ntBASIC3.55□□□□□ -1.84
CASP1P29466 HSPD1P15-201ENST00000505573 1122 ntBASIC3.55□□□□□ -1.84
CASP1P29466 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.55□□□□□ -1.84
CASP1P29466 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.55□□□□□ -1.84
CASP1P29466 NDUFB4P9-201ENST00000511646 388 ntBASIC3.55□□□□□ -1.84
CASP1P29466 snoU109.6-201ENST00000516831 118 ntBASIC3.55□□□□□ -1.84
CASP1P29466 RN7SKP289-201ENST00000517244 295 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.55□□□□□ -1.84
CASP1P29466 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.55□□□□□ -1.84
CASP1P29466 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.55□□□□□ -1.84
CASP1P29466 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.55□□□□□ -1.84
CASP1P29466 AC011611.1-201ENST00000552179 197 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AL135786.2-201ENST00000608422 615 ntBASIC3.55□□□□□ -1.84
CASP1P29466 AL157817.1-201ENST00000614264 790 ntBASIC3.55□□□□□ -1.84
CASP1P29466 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CASP1P29466 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CASP1P29466 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CASP1P29466 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CASP1P29466 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CASP1P29466 MTND4LP21-201ENST00000415303 295 ntBASIC3.54□□□□□ -1.84
CASP1P29466 RPL7P53-201ENST00000421245 739 ntBASIC3.54□□□□□ -1.84
CASP1P29466 RPF2P1-201ENST00000424137 906 ntBASIC3.54□□□□□ -1.84
CASP1P29466 AC005019.1-201ENST00000436455 431 ntBASIC3.54□□□□□ -1.84
CASP1P29466 RPL23AP22-201ENST00000437556 453 ntBASIC3.54□□□□□ -1.84
CASP1P29466 PRDX3P3-201ENST00000447765 522 ntBASIC3.54□□□□□ -1.84
CASP1P29466 EIF4A1P11-201ENST00000451239 222 ntBASIC3.54□□□□□ -1.84
CASP1P29466 TRBV8-1-201ENST00000481590 279 ntBASIC3.54□□□□□ -1.84
CASP1P29466 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.54□□□□□ -1.84
CASP1P29466 RNA5SP217-201ENST00000515959 91 ntBASIC3.54□□□□□ -1.84
CASP1P29466 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.54□□□□□ -1.84
CASP1P29466 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.54□□□□□ -1.84
CASP1P29466 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.54□□□□□ -1.84
CASP1P29466 AL845331.3-202ENST00000562856 261 ntBASIC3.54□□□□□ -1.84
CASP1P29466 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.54□□□□□ -1.84
CASP1P29466 MIR4429-201ENST00000580105 73 ntBASIC3.54□□□□□ -1.84
CASP1P29466 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.54□□□□□ -1.84
CASP1P29466 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.54□□□□□ -1.84
CASP1P29466 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.54□□□□□ -1.84
CASP1P29466 CKS1BP3-201ENST00000600888 237 ntBASIC3.54□□□□□ -1.84
CASP1P29466 PRELID3BP8-201ENST00000604148 295 ntBASIC3.54□□□□□ -1.84
CASP1P29466 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.54□□□□□ -1.84
CASP1P29466 MIR6798-201ENST00000612887 67 ntBASIC3.54□□□□□ -1.84
CASP1P29466 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CASP1P29466 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
CASP1P29466 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CASP1P29466 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CASP1P29466 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CASP1P29466 U3.6-201ENST00000363622 211 ntBASIC3.53□□□□□ -1.84
CASP1P29466 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.53□□□□□ -1.84
CASP1P29466 AC091862.1-201ENST00000438016 1100 ntBASIC3.53□□□□□ -1.84
CASP1P29466 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CASP1P29466 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.53□□□□□ -1.84
CASP1P29466 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CASP1P29466 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.53□□□□□ -1.84
CASP1P29466 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.53□□□□□ -1.84
CASP1P29466 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.53□□□□□ -1.84
CASP1P29466 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.53□□□□□ -1.84
CASP1P29466 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.53□□□□□ -1.84
CASP1P29466 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
CASP1P29466 AC015967.1-201ENST00000619893 476 ntBASIC3.53□□□□□ -1.84
CASP1P29466 AL049781.1-201ENST00000623195 3585 ntBASIC3.53□□□□□ -1.84
CASP1P29466 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
CASP1P29466 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CASP1P29466 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP1P29466 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.52□□□□□ -1.85
CASP1P29466 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP1P29466 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP1P29466 RNA5SP383-201ENST00000362934 120 ntBASIC3.52□□□□□ -1.85
CASP1P29466 RNU6-805P-201ENST00000365643 106 ntBASIC3.52□□□□□ -1.85
CASP1P29466 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP1P29466 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.52□□□□□ -1.85
CASP1P29466 MIR670-201ENST00000390142 98 ntBASIC3.52□□□□□ -1.85
CASP1P29466 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP1P29466 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.52□□□□□ -1.85
CASP1P29466 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.52□□□□□ -1.85
CASP1P29466 RAB9AP5-201ENST00000437794 597 ntBASIC3.52□□□□□ -1.85
CASP1P29466 RPS12P18-201ENST00000442381 270 ntBASIC3.52□□□□□ -1.85
CASP1P29466 RAB9AP2-201ENST00000443911 597 ntBASIC3.52□□□□□ -1.85
CASP1P29466 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.52□□□□□ -1.85
CASP1P29466 AC243772.1-201ENST00000451620 410 ntBASIC3.52□□□□□ -1.85
CASP1P29466 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.52□□□□□ -1.85
CASP1P29466 BTF3P5-201ENST00000457252 467 ntBASIC3.52□□□□□ -1.85
CASP1P29466 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms