Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC127502.3-201ENST00000636170 1206 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
POLR2AP24928 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
POLR2AP24928 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
POLR2AP24928 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
POLR2AP24928 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
POLR2AP24928 AP000432.2-201ENST00000624164 2048 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
POLR2AP24928 RNU6-31P-201ENST00000384388 108 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 AC007068.1-201ENST00000396690 844 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 EI24P3-201ENST00000399046 1062 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.04□□□□□ -1.6
POLR2AP24928 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.04□□□□□ -1.6
POLR2AP24928 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.04□□□□□ -1.6
POLR2AP24928 MRPS10P2-201ENST00000431226 381 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 UBE2V1P8-201ENST00000437166 265 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 AL591503.2-201ENST00000442314 1005 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 RPL5P32-201ENST00000454085 879 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.04□□□□□ -1.6
POLR2AP24928 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.04□□□□□ -1.6
POLR2AP24928 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.04□□□□□ -1.6
POLR2AP24928 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
POLR2AP24928 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.04□□□□□ -1.6
POLR2AP24928 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.04□□□□□ -1.6
POLR2AP24928 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.04□□□□□ -1.6
POLR2AP24928 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.04□□□□□ -1.6
POLR2AP24928 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.04□□□□□ -1.6
POLR2AP24928 MIR5708-201ENST00000579723 85 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 AC012254.4-201ENST00000588843 273 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.04□□□□□ -1.6
POLR2AP24928 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.04□□□□□ -1.6
POLR2AP24928 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.04□□□□□ -1.6
POLR2AP24928 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.04□□□□□ -1.6
POLR2AP24928 AC131235.4-201ENST00000609288 620 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 RMST_5.1-201ENST00000618704 126 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 AC015908.5-201ENST00000623289 343 ntBASIC5.04□□□□□ -1.6
POLR2AP24928 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
POLR2AP24928 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
POLR2AP24928 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 RNU1-20P-201ENST00000363314 162 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 RNU6-213P-201ENST00000384051 104 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 AC007899.1-201ENST00000412776 775 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 TPT1P2-201ENST00000413105 503 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.03□□□□□ -1.6
POLR2AP24928 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
POLR2AP24928 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 NOTCH2P1-201ENST00000443481 624 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 AC112653.1-201ENST00000443851 386 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 BTF3P6-201ENST00000448054 499 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 AC006499.5-201ENST00000505037 514 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 NPM1P21-201ENST00000513394 762 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 NDUFA5P2-201ENST00000519723 344 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.03□□□□□ -1.6
POLR2AP24928 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
POLR2AP24928 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.03□□□□□ -1.6
POLR2AP24928 OR4K7P-201ENST00000580232 945 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 AC012468.1-201ENST00000604888 430 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
POLR2AP24928 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.03□□□□□ -1.6
POLR2AP24928 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
POLR2AP24928 MTND4P31-201ENST00000425607 1343 ntBASIC5.03□□□□□ -1.6
POLR2AP24928 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.03□□□□□ -1.6
POLR2AP24928 AC073055.1-201ENST00000456901 1621 ntBASIC5.02□□□□□ -1.61
POLR2AP24928 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.02□□□□□ -1.61
POLR2AP24928 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
POLR2AP24928 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.02□□□□□ -1.61
POLR2AP24928 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.02□□□□□ -1.61
POLR2AP24928 RNA5SP513-201ENST00000364648 118 ntBASIC5.02□□□□□ -1.61
POLR2AP24928 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.02□□□□□ -1.61
POLR2AP24928 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.02□□□□□ -1.61
POLR2AP24928 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.02□□□□□ -1.61
POLR2AP24928 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.02□□□□□ -1.61
POLR2AP24928 TMX2P1-201ENST00000436507 708 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms