Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFSF4P23510 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFSF4P23510 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
TNFSF4P23510 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TNFSF4P23510 RN7SKP145-201ENST00000363291 303 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 RNU5F-7P-201ENST00000363696 115 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 Y_RNA.234-201ENST00000364409 97 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
TNFSF4P23510 RN7SKP182-201ENST00000410772 298 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC245052.5-201ENST00000416320 649 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 AL391219.1-201ENST00000422570 483 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC124944.2-201ENST00000429866 1242 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 MTCYBP45-201ENST00000435243 565 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 RPL37P21-201ENST00000435890 276 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFSF4P23510 COX6CP2-201ENST00000444980 225 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AP000542.1-201ENST00000448473 371 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TNFSF4P23510 Z92846.1-201ENST00000456203 268 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 OR6K1P-201ENST00000456766 971 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC011225.1-201ENST00000457751 369 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC053481.1-201ENST00000467217 306 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC006967.1-201ENST00000467608 589 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 HMGB1P25-201ENST00000468402 607 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 HMGB1P36-201ENST00000487709 576 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC080014.1-201ENST00000496877 1201 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 RPSAP51-201ENST00000497462 645 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC024558.1-201ENST00000505008 528 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 RPS4XP20-201ENST00000505751 772 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFSF4P23510 MTND5P13-201ENST00000513046 1079 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFSF4P23510 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.51□□□□□ -1.69
TNFSF4P23510 GSTP1P1-201ENST00000548078 319 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC023161.2-201ENST00000551218 780 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 AC091489.2-201ENST00000566263 604 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 MIR4489-201ENST00000578869 62 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AL358072.1-201ENST00000604156 575 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC004853.1-201ENST00000604902 698 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC011816.2-201ENST00000607089 556 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AL121612.2-201ENST00000612261 482 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFSF4P23510 CYP4F35P-202ENST00000636121 390 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 AC135068.12-201ENST00000637370 931 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 RARSP1-201ENST00000542842 1418 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TNFSF4P23510 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF4P23510 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF4P23510 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.51□□□□□ -1.69
TNFSF4P23510 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF4P23510 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF4P23510 LINC01355-201ENST00000566551 5444 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF4P23510 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC008033.1-201ENST00000216407 1162 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF4P23510 RNA5SP183-201ENST00000362452 119 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 RNY4P24-201ENST00000362735 96 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 RNU4-21P-201ENST00000362802 126 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 RNU6-769P-201ENST00000384407 104 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 U8.14-201ENST00000390843 143 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AL356421.1-201ENST00000403255 413 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
TNFSF4P23510 RPL19P16-201ENST00000433839 588 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 RPS29P10-201ENST00000439197 166 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AL163193.1-201ENST00000444895 788 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 CBX1P2-201ENST00000453841 458 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFSF4P23510 RPS4XP1-201ENST00000482189 787 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms