Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
LIG1P18858 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.22□□□□□ -1.41
LIG1P18858 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.22□□□□□ -1.41
LIG1P18858 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
LIG1P18858 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.21□□□□□ -1.41
LIG1P18858 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.21□□□□□ -1.41
LIG1P18858 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
LIG1P18858 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
LIG1P18858 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LIG1P18858 MTCO1P11-201ENST00000429111 1528 ntBASIC6.21□□□□□ -1.42
LIG1P18858 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
LIG1P18858 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIG1P18858 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIG1P18858 OR4A15-201ENST00000314706 1035 ntBASIC6.21□□□□□ -1.42
LIG1P18858 Y_RNA.1-201ENST00000352915 104 ntBASIC6.21□□□□□ -1.42
LIG1P18858 SNORA51.1-201ENST00000363243 140 ntBASIC6.21□□□□□ -1.42
LIG1P18858 SNORA63-201ENST00000363450 132 ntBASIC6.21□□□□□ -1.42
LIG1P18858 U3.7-201ENST00000363668 216 ntBASIC6.21□□□□□ -1.42
LIG1P18858 RNA5SP131-201ENST00000365452 119 ntBASIC6.21□□□□□ -1.42
LIG1P18858 RNU6-533P-201ENST00000384144 107 ntBASIC6.21□□□□□ -1.42
LIG1P18858 Y_RNA.529-201ENST00000384586 119 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LIG1P18858 RPL12P9-201ENST00000412942 488 ntBASIC6.21□□□□□ -1.42
LIG1P18858 HMGB3P20-201ENST00000417997 600 ntBASIC6.21□□□□□ -1.42
LIG1P18858 PIGFP2-201ENST00000421400 651 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 AC079355.1-201ENST00000421770 223 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AL158073.1-201ENST00000426848 1104 ntBASIC6.21□□□□□ -1.42
LIG1P18858 RPL19P16-201ENST00000433839 588 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 CALM1P1-201ENST00000442082 433 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 AL450996.1-201ENST00000445574 1202 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AL035090.1-201ENST00000454835 332 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 POU5F1P7-201ENST00000508759 541 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 AC016559.2-201ENST00000510759 359 ntBASIC6.21□□□□□ -1.42
LIG1P18858 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.21□□□□□ -1.42
LIG1P18858 SNORA48.10-201ENST00000516965 160 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 ARL2BPP2-201ENST00000550907 489 ntBASIC6.21□□□□□ -1.42
LIG1P18858 RPL21P5-201ENST00000554662 472 ntBASIC6.21□□□□□ -1.42
LIG1P18858 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 AL359212.1-201ENST00000556608 614 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.21□□□□□ -1.42
LIG1P18858 AC093519.1-201ENST00000566109 298 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.21□□□□□ -1.42
LIG1P18858 RN7SL753P-201ENST00000581238 290 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.21□□□□□ -1.42
LIG1P18858 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.21□□□□□ -1.42
LIG1P18858 AL442067.2-201ENST00000614033 363 ntBASIC6.21□□□□□ -1.42
LIG1P18858 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.21□□□□□ -1.42
LIG1P18858 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.21□□□□□ -1.42
LIG1P18858 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.21□□□□□ -1.42
LIG1P18858 AC019278.1-201ENST00000623516 479 ntBASIC6.21□□□□□ -1.42
LIG1P18858 PISRT1-201ENST00000626175 531 ntBASIC6.21□□□□□ -1.42
LIG1P18858 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIG1P18858 AP000756.2-201ENST00000624168 2567 ntBASIC6.21□□□□□ -1.42
LIG1P18858 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LIG1P18858 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LIG1P18858 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
LIG1P18858 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.2□□□□□ -1.42
LIG1P18858 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.2□□□□□ -1.42
LIG1P18858 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.2□□□□□ -1.42
LIG1P18858 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 SNORD56.2-201ENST00000363242 71 ntBASIC6.2□□□□□ -1.42
LIG1P18858 OR1L6-202ENST00000373684 1044 ntBASIC6.2□□□□□ -1.42
LIG1P18858 Y_RNA.409-201ENST00000383990 98 ntBASIC6.2□□□□□ -1.42
LIG1P18858 SNORA51.12-201ENST00000384448 134 ntBASIC6.2□□□□□ -1.42
LIG1P18858 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 Y_RNA.608-201ENST00000410647 95 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AL136133.1-201ENST00000413694 376 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AC007390.1-201ENST00000415722 356 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AC092634.6-201ENST00000418558 192 ntBASIC6.2□□□□□ -1.42
LIG1P18858 BTF3L4P3-201ENST00000418879 476 ntBASIC6.2□□□□□ -1.42
LIG1P18858 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 AL390119.1-201ENST00000440329 312 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.2□□□□□ -1.42
LIG1P18858 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.2□□□□□ -1.42
LIG1P18858 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 OR6K1P-201ENST00000456766 971 ntBASIC6.2□□□□□ -1.42
LIG1P18858 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.2□□□□□ -1.42
LIG1P18858 AL136038.1-201ENST00000497246 351 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.2□□□□□ -1.42
LIG1P18858 OR5AN2P-201ENST00000534535 896 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.2□□□□□ -1.42
LIG1P18858 RPS3AP23-202ENST00000574601 686 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms