Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 AC010300.1-201ENST00000600671 5134 ntBASIC4.38□□□□□ -1.71
PCNAP12004 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.38□□□□□ -1.71
PCNAP12004 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.38□□□□□ -1.71
PCNAP12004 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.37□□□□□ -1.71
PCNAP12004 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCNAP12004 NXPH1-205ENST00000602349 1953 ntBASIC4.37□□□□□ -1.71
PCNAP12004 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 AC021146.4-201ENST00000309229 279 ntBASIC4.37□□□□□ -1.71
PCNAP12004 RNU6-492P-201ENST00000363035 104 ntBASIC4.37□□□□□ -1.71
PCNAP12004 MTCO3P31-201ENST00000405526 789 ntBASIC4.37□□□□□ -1.71
PCNAP12004 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.37□□□□□ -1.71
PCNAP12004 AC092634.6-201ENST00000418558 192 ntBASIC4.37□□□□□ -1.71
PCNAP12004 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 AC006466.1-201ENST00000438721 289 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AC011753.3-201ENST00000443436 406 ntBASIC4.37□□□□□ -1.71
PCNAP12004 OR6K5P-201ENST00000447050 945 ntBASIC4.37□□□□□ -1.71
PCNAP12004 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AC108022.1-201ENST00000493466 478 ntBASIC4.37□□□□□ -1.71
PCNAP12004 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.37□□□□□ -1.71
PCNAP12004 WBP1LP4-201ENST00000505043 344 ntBASIC4.37□□□□□ -1.71
PCNAP12004 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 AC079395.1-201ENST00000510981 262 ntBASIC4.37□□□□□ -1.71
PCNAP12004 RNA5SP446-201ENST00000515955 82 ntBASIC4.37□□□□□ -1.71
PCNAP12004 RNU6-1129P-201ENST00000515964 104 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 AP001189.2-201ENST00000527320 189 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AP003461.1-201ENST00000528866 78 ntBASIC4.37□□□□□ -1.71
PCNAP12004 TOMM20P2-201ENST00000540082 421 ntBASIC4.37□□□□□ -1.71
PCNAP12004 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.37□□□□□ -1.71
PCNAP12004 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.37□□□□□ -1.71
PCNAP12004 AC115621.1-201ENST00000604653 858 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.37□□□□□ -1.71
PCNAP12004 AL049539.1-201ENST00000611964 459 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.37□□□□□ -1.71
PCNAP12004 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AP001784.1-201ENST00000624107 428 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AC004943.3-201ENST00000624116 600 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AP000843.1-201ENST00000624880 701 ntBASIC4.37□□□□□ -1.71
PCNAP12004 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.37□□□□□ -1.71
PCNAP12004 AC107081.3-201ENST00000612715 2034 ntBASIC4.37□□□□□ -1.71
PCNAP12004 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PCNAP12004 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCNAP12004 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCNAP12004 MTCO1P14-201ENST00000441695 1559 ntBASIC4.36□□□□□ -1.71
PCNAP12004 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.36□□□□□ -1.71
PCNAP12004 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCNAP12004 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCNAP12004 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCNAP12004 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCNAP12004 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.36□□□□□ -1.71
PCNAP12004 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCNAP12004 OR5H2-201ENST00000355273 945 ntBASIC4.36□□□□□ -1.71
PCNAP12004 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCNAP12004 SNORA58B-201ENST00000364259 136 ntBASIC4.36□□□□□ -1.71
PCNAP12004 RNU6-115P-201ENST00000364310 107 ntBASIC4.36□□□□□ -1.71
PCNAP12004 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCNAP12004 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
PCNAP12004 RNA5SP87-201ENST00000384155 118 ntBASIC4.36□□□□□ -1.71
PCNAP12004 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.36□□□□□ -1.71
PCNAP12004 TAF9BP1-201ENST00000396646 746 ntBASIC4.36□□□□□ -1.71
PCNAP12004 ATP5F1P3-201ENST00000397213 657 ntBASIC4.36□□□□□ -1.71
PCNAP12004 AL049545.1-201ENST00000401856 572 ntBASIC4.36□□□□□ -1.71
PCNAP12004 TMSB4XP8-201ENST00000402089 135 ntBASIC4.36□□□□□ -1.71
PCNAP12004 RN7SKP167-201ENST00000411047 285 ntBASIC4.36□□□□□ -1.71
PCNAP12004 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.36□□□□□ -1.71
PCNAP12004 TMSB4XP6-201ENST00000415187 135 ntBASIC4.36□□□□□ -1.71
PCNAP12004 MTCO3P1-205ENST00000422088 832 ntBASIC4.36□□□□□ -1.71
PCNAP12004 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.36□□□□□ -1.71
PCNAP12004 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.36□□□□□ -1.71
PCNAP12004 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.36□□□□□ -1.71
PCNAP12004 TMSB4XP1-201ENST00000424567 135 ntBASIC4.36□□□□□ -1.71
PCNAP12004 MTND2P22-201ENST00000444325 1033 ntBASIC4.36□□□□□ -1.71
PCNAP12004 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.36□□□□□ -1.71
PCNAP12004 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.36□□□□□ -1.71
PCNAP12004 RPS26P28-201ENST00000470806 348 ntBASIC4.36□□□□□ -1.71
PCNAP12004 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.36□□□□□ -1.71
PCNAP12004 GAPDHP36-201ENST00000480688 918 ntBASIC4.36□□□□□ -1.71
PCNAP12004 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.36□□□□□ -1.71
PCNAP12004 AC010587.2-201ENST00000511727 448 ntBASIC4.36□□□□□ -1.71
PCNAP12004 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.36□□□□□ -1.71
PCNAP12004 IGHV3-32-201ENST00000519182 355 ntBASIC4.36□□□□□ -1.71
PCNAP12004 IGLV3-26-201ENST00000520756 302 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms