Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 NACA3P-201ENST00000359690 648 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 RPL7P25-201ENST00000404151 721 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 CST9LP2-201ENST00000437612 320 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.43□□□□□ -1.54
TOP2AP11388 RPL31P50-201ENST00000471002 296 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 AC090543.2-201ENST00000483963 348 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.43□□□□□ -1.54
TOP2AP11388 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.43□□□□□ -1.54
TOP2AP11388 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TOP2AP11388 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.43□□□□□ -1.54
TOP2AP11388 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TOP2AP11388 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TOP2AP11388 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TOP2AP11388 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP2AP11388 MIR30E-201ENST00000362104 92 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 RNA5SP126-201ENST00000365092 109 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 AL160175.1-201ENST00000428124 247 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 AC092447.2-201ENST00000435487 669 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.43□□□□□ -1.54
TOP2AP11388 RPS12P18-201ENST00000442381 270 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.43□□□□□ -1.54
TOP2AP11388 AC027309.2-201ENST00000520566 192 ntBASIC5.43□□□□□ -1.54
TOP2AP11388 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.42□□□□□ -1.54
TOP2AP11388 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP2AP11388 RNU6-301P-201ENST00000384277 107 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 MRPS31P2-201ENST00000451581 518 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.42□□□□□ -1.54
TOP2AP11388 HIGD1AP13-201ENST00000509878 289 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.42□□□□□ -1.54
TOP2AP11388 AC103881.1-201ENST00000603476 538 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 HMGB1P50-201ENST00000605814 607 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.42□□□□□ -1.54
TOP2AP11388 CYCSP41-201ENST00000616920 296 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 AP003485.2-201ENST00000623636 610 ntBASIC5.42□□□□□ -1.54
TOP2AP11388 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP2AP11388 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TOP2AP11388 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TOP2AP11388 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TOP2AP11388 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TOP2AP11388 ZNF603P-201ENST00000405613 487 ntBASIC5.41□□□□□ -1.54
TOP2AP11388 RN7SKP222-201ENST00000410651 315 ntBASIC5.41□□□□□ -1.54
TOP2AP11388 SETP15-201ENST00000412724 337 ntBASIC5.41□□□□□ -1.54
TOP2AP11388 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.41□□□□□ -1.54
TOP2AP11388 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.41□□□□□ -1.54
TOP2AP11388 AC013412.1-201ENST00000610687 192 ntBASIC5.41□□□□□ -1.54
TOP2AP11388 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.41□□□□□ -1.54
TOP2AP11388 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TOP2AP11388 AP003122.5-201ENST00000527668 3766 ntBASIC5.41□□□□□ -1.54
TOP2AP11388 FAM35DP-201ENST00000323387 2712 ntBASIC5.41□□□□□ -1.54
TOP2AP11388 AC000403.1-201ENST00000613696 3585 ntBASIC5.41□□□□□ -1.54
TOP2AP11388 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TOP2AP11388 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.4□□□□□ -1.54
TOP2AP11388 AC108206.1-201ENST00000570186 4159 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TOP2AP11388 MIR449A-201ENST00000362113 91 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.4□□□□□ -1.54
TOP2AP11388 SNORA18.3-201ENST00000384122 132 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.4□□□□□ -1.54
TOP2AP11388 RPS24P13-201ENST00000442520 397 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 AC112653.1-201ENST00000443851 386 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TOP2AP11388 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.4□□□□□ -1.54
TOP2AP11388 RNU1-143P-201ENST00000516296 146 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.4□□□□□ -1.54
TOP2AP11388 U1.23-201ENST00000610293 146 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 RNU1-68P-201ENST00000615382 146 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 U1.39-201ENST00000621562 146 ntBASIC5.4□□□□□ -1.54
TOP2AP11388 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TOP2AP11388 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TOP2AP11388 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TOP2AP11388 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TOP2AP11388 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TOP2AP11388 OR1S2-201ENST00000302592 978 ntBASIC5.39□□□□□ -1.55
TOP2AP11388 MIR22-201ENST00000362190 85 ntBASIC5.39□□□□□ -1.55
TOP2AP11388 RPL12P26-201ENST00000452430 487 ntBASIC5.39□□□□□ -1.55
TOP2AP11388 AP000942.1-201ENST00000463969 747 ntBASIC5.39□□□□□ -1.55
TOP2AP11388 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.39□□□□□ -1.55
TOP2AP11388 HMGB1P19-201ENST00000517578 577 ntBASIC5.39□□□□□ -1.55
TOP2AP11388 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.39□□□□□ -1.55
TOP2AP11388 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.39□□□□□ -1.55
TOP2AP11388 AC022146.1-201ENST00000595307 847 ntBASIC5.39□□□□□ -1.55
TOP2AP11388 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TOP2AP11388 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TOP2AP11388 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
TOP2AP11388 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TOP2AP11388 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.38□□□□□ -1.55
TOP2AP11388 AC108734.1-201ENST00000439549 399 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 AC112492.1-201ENST00000449607 712 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 AL109933.2-201ENST00000452651 260 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 RPS4XP22-201ENST00000480755 780 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 AL139174.1-201ENST00000531489 886 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP2AP11388 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.38□□□□□ -1.55
TOP2AP11388 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP2AP11388 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.38□□□□□ -1.55
TOP2AP11388 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.38□□□□□ -1.55
TOP2AP11388 VN1R90P-201ENST00000595717 726 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms