Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NMD3P1-201ENST00000439704 1488 ntBASIC4.25□□□□□ -1.73
TOP1P11387 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP1P11387 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TOP1P11387 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TOP1P11387 MIR153-1-201ENST00000384914 90 ntBASIC4.25□□□□□ -1.73
TOP1P11387 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP1P11387 CYCSP4-201ENST00000429682 331 ntBASIC4.25□□□□□ -1.73
TOP1P11387 PDSS1P2-201ENST00000449397 678 ntBASIC4.25□□□□□ -1.73
TOP1P11387 PPIAP3-201ENST00000450588 505 ntBASIC4.25□□□□□ -1.73
TOP1P11387 AC073387.1-201ENST00000453261 709 ntBASIC4.25□□□□□ -1.73
TOP1P11387 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.25□□□□□ -1.73
TOP1P11387 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.25□□□□□ -1.73
TOP1P11387 RNU6-751P-201ENST00000516382 101 ntBASIC4.25□□□□□ -1.73
TOP1P11387 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
TOP1P11387 AC104997.1-201ENST00000519761 717 ntBASIC4.25□□□□□ -1.73
TOP1P11387 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP1P11387 IGKV2D-19-201ENST00000523346 262 ntBASIC4.25□□□□□ -1.73
TOP1P11387 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.25□□□□□ -1.73
TOP1P11387 MIMT1-201ENST00000597105 1050 ntBASIC4.25□□□□□ -1.73
TOP1P11387 AC010591.1-201ENST00000603941 649 ntBASIC4.25□□□□□ -1.73
TOP1P11387 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP1P11387 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
TOP1P11387 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP1P11387 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOP1P11387 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP1P11387 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOP1P11387 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP1P11387 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TOP1P11387 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.24□□□□□ -1.73
TOP1P11387 RNA5SP119-201ENST00000362715 117 ntBASIC4.24□□□□□ -1.73
TOP1P11387 HNRNPDP2-201ENST00000406475 478 ntBASIC4.24□□□□□ -1.73
TOP1P11387 MTHFD2P2-201ENST00000407725 247 ntBASIC4.24□□□□□ -1.73
TOP1P11387 Z98941.1-201ENST00000407764 100 ntBASIC4.24□□□□□ -1.73
TOP1P11387 MIR1183-201ENST00000408856 89 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.24□□□□□ -1.73
TOP1P11387 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP1P11387 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
TOP1P11387 HMGN2P31-201ENST00000432430 273 ntBASIC4.24□□□□□ -1.73
TOP1P11387 RPS26P40-201ENST00000435209 294 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP1P11387 SUMO1P1-201ENST00000497904 306 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP1P11387 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP1P11387 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP1P11387 AC110792.2-201ENST00000510278 224 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP1P11387 IGKV2-36-201ENST00000519999 223 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AC023161.2-201ENST00000551218 780 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AL121576.1-201ENST00000556055 276 ntBASIC4.24□□□□□ -1.73
TOP1P11387 TRAV15-201ENST00000556680 249 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP1P11387 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP1P11387 AC069304.3-201ENST00000603938 1084 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AL392112.1-201ENST00000605115 829 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AC069209.1-201ENST00000619282 651 ntBASIC4.24□□□□□ -1.73
TOP1P11387 AL732618.1-201ENST00000623251 301 ntBASIC4.24□□□□□ -1.73
TOP1P11387 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP1P11387 OR6C71P-202ENST00000641886 1107 ntBASIC4.24□□□□□ -1.73
TOP1P11387 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOP1P11387 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOP1P11387 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP1P11387 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOP1P11387 AC022031.1-201ENST00000585985 2593 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 CEP170P1-201ENST00000502249 4587 ntBASIC4.23□□□□□ -1.73
TOP1P11387 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TOP1P11387 RNA5SP167-201ENST00000365461 116 ntBASIC4.23□□□□□ -1.73
TOP1P11387 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TOP1P11387 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOP1P11387 AC004987.3-201ENST00000413879 771 ntBASIC4.23□□□□□ -1.73
TOP1P11387 RPS29P4-201ENST00000414733 161 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 RPL6P5-201ENST00000445678 828 ntBASIC4.23□□□□□ -1.73
TOP1P11387 EXTL2P1-201ENST00000446218 416 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AL358232.1-201ENST00000448030 501 ntBASIC4.23□□□□□ -1.73
TOP1P11387 TVP23BP2-201ENST00000455082 615 ntBASIC4.23□□□□□ -1.73
TOP1P11387 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.23□□□□□ -1.73
TOP1P11387 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 AC098799.1-201ENST00000504752 800 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AC021146.1-201ENST00000511202 716 ntBASIC4.23□□□□□ -1.73
TOP1P11387 HMGB1P47-201ENST00000511281 589 ntBASIC4.23□□□□□ -1.73
TOP1P11387 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.23□□□□□ -1.73
TOP1P11387 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.23□□□□□ -1.73
TOP1P11387 RN7SKP13-201ENST00000515933 244 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.23□□□□□ -1.73
TOP1P11387 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.23□□□□□ -1.73
TOP1P11387 CCNG2P1-201ENST00000549521 1000 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 AC006270.2-201ENST00000578523 652 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP1P11387 MIR3922-201ENST00000585192 84 ntBASIC4.23□□□□□ -1.73
TOP1P11387 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.23□□□□□ -1.73
TOP1P11387 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.23□□□□□ -1.73
TOP1P11387 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.23□□□□□ -1.73
TOP1P11387 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms