Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNU4-25P-201ENST00000410569 230 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 RPS7P9-201ENST00000414704 586 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 FCF1P2-201ENST00000415284 583 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 AL139095.3-201ENST00000419672 1203 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AL592293.2-201ENST00000422292 996 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 CHIAP3-201ENST00000423668 1133 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.7□□□□□ -1.82
SFTPBP07988 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.7□□□□□ -1.82
SFTPBP07988 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.7□□□□□ -1.82
SFTPBP07988 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.7□□□□□ -1.82
SFTPBP07988 EIF2S2P2-201ENST00000447161 982 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 COX6CP18-201ENST00000448769 222 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 NPM1P13-201ENST00000452663 865 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.7□□□□□ -1.82
SFTPBP07988 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 RPL23AP24-201ENST00000458203 385 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 RPL35AP15-201ENST00000468042 339 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC011276.1-201ENST00000469688 323 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC103987.1-201ENST00000473394 348 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC146944.2-203ENST00000502493 354 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC139495.1-202ENST00000513164 354 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.7□□□□□ -1.82
SFTPBP07988 RNU6-1028P-201ENST00000517164 93 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 MTCO3P15-201ENST00000526563 574 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 AC092470.1-201ENST00000546187 132 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 OR6C73P-201ENST00000546432 358 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AL352979.3-201ENST00000553515 247 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC074050.1-201ENST00000563247 211 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 SNORD39.3-201ENST00000584451 71 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
SFTPBP07988 AC079587.1-201ENST00000603846 277 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.7□□□□□ -1.82
SFTPBP07988 AL136370.1-201ENST00000608166 691 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AF129408.1-201ENST00000608767 431 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SFTPBP07988 AC004808.1-201ENST00000627671 721 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.7□□□□□ -1.82
SFTPBP07988 MIR6830-201ENST00000636015 70 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 AC099654.8-201ENST00000637757 681 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 FP325313.1-201ENST00000638228 703 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SFTPBP07988 AC027287.1-201ENST00000553115 1453 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 MTCO1P24-201ENST00000515438 1558 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SFTPBP07988 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.7□□□□□ -1.82
SFTPBP07988 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 AC008725.1-201ENST00000605123 2263 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SFTPBP07988 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SFTPBP07988 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SFTPBP07988 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SFTPBP07988 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SFTPBP07988 LINC02471-203ENST00000641941 4752 ntBASIC3.7□□□□□ -1.82
SFTPBP07988 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SFTPBP07988 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.7□□□□□ -1.82
SFTPBP07988 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SFTPBP07988 AL133412.1-201ENST00000380194 2992 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SFTPBP07988 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SFTPBP07988 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SFTPBP07988 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SFTPBP07988 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.69□□□□□ -1.82
SFTPBP07988 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SFTPBP07988 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SFTPBP07988 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SFTPBP07988 AC008033.1-201ENST00000216407 1162 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 RNA5SP388-201ENST00000362584 119 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AL136133.1-201ENST00000413694 376 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 RPL31P2-201ENST00000413849 377 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 TMSB10P2-201ENST00000416049 131 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.69□□□□□ -1.82
SFTPBP07988 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AL356387.2-201ENST00000422272 243 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.69□□□□□ -1.82
SFTPBP07988 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.69□□□□□ -1.82
SFTPBP07988 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.69□□□□□ -1.82
SFTPBP07988 B3GNT2P1-201ENST00000434960 952 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 HMGN2P21-201ENST00000447764 270 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.69□□□□□ -1.82
SFTPBP07988 DHFRP3-201ENST00000455595 559 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AC104982.1-201ENST00000478775 574 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 RN7SL812P-201ENST00000493791 279 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.69□□□□□ -1.82
SFTPBP07988 DYNLL1P6-201ENST00000503440 264 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.69□□□□□ -1.82
SFTPBP07988 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.69□□□□□ -1.82
SFTPBP07988 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.69□□□□□ -1.82
SFTPBP07988 RN7SKP122-201ENST00000515923 296 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 SNORA19.3-201ENST00000516165 130 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.69□□□□□ -1.82
SFTPBP07988 AC019227.1-201ENST00000526902 510 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AP000790.1-201ENST00000528891 737 ntBASIC3.69□□□□□ -1.82
SFTPBP07988 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms