Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 XPOTP1-201ENST00000443317 2398 ntBASIC3.11□□□□□ -1.91
APOC1P02654 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
APOC1P02654 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
APOC1P02654 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
APOC1P02654 AL161912.2-201ENST00000565707 3007 ntBASIC3.1□□□□□ -1.91
APOC1P02654 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
APOC1P02654 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOC1P02654 SAR1AP2-201ENST00000392696 594 ntBASIC3.1□□□□□ -1.91
APOC1P02654 RPL5P18-201ENST00000406671 891 ntBASIC3.1□□□□□ -1.91
APOC1P02654 RAB28P1-201ENST00000411517 641 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.1□□□□□ -1.91
APOC1P02654 GTF2IP23-201ENST00000423746 351 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AC074367.1-201ENST00000438685 1125 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.1□□□□□ -1.91
APOC1P02654 AC093392.2-201ENST00000450682 337 ntBASIC3.1□□□□□ -1.91
APOC1P02654 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOC1P02654 RPL21P8-201ENST00000465083 535 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.1□□□□□ -1.91
APOC1P02654 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.1□□□□□ -1.91
APOC1P02654 AC023050.1-201ENST00000498198 304 ntBASIC3.1□□□□□ -1.91
APOC1P02654 KCTD9P5-201ENST00000504141 1170 ntBASIC3.1□□□□□ -1.91
APOC1P02654 ATG10-AS1-201ENST00000504846 648 ntBASIC3.1□□□□□ -1.91
APOC1P02654 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.1□□□□□ -1.91
APOC1P02654 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
APOC1P02654 MED28P5-201ENST00000528254 438 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
APOC1P02654 RN7SL703P-201ENST00000578485 302 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.1□□□□□ -1.91
APOC1P02654 LLPHP1-201ENST00000603571 367 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AP003117.2-201ENST00000606010 545 ntBASIC3.1□□□□□ -1.91
APOC1P02654 AC022149.2-201ENST00000621061 203 ntBASIC3.1□□□□□ -1.91
APOC1P02654 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOC1P02654 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.1□□□□□ -1.91
APOC1P02654 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.09□□□□□ -1.91
APOC1P02654 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOC1P02654 ATP5A1P2-201ENST00000412323 255 ntBASIC3.09□□□□□ -1.91
APOC1P02654 MTND4P22-201ENST00000413116 1169 ntBASIC3.09□□□□□ -1.91
APOC1P02654 RAB9AP4-201ENST00000415230 609 ntBASIC3.09□□□□□ -1.91
APOC1P02654 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 AC245291.1-201ENST00000419501 328 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC048351.1-201ENST00000420064 602 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 RPL23AP4-201ENST00000427757 463 ntBASIC3.09□□□□□ -1.91
APOC1P02654 NPM1P24-201ENST00000428039 894 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.09□□□□□ -1.91
APOC1P02654 HIGD1AP11-201ENST00000438361 280 ntBASIC3.09□□□□□ -1.91
APOC1P02654 RPS29P7-201ENST00000439662 171 ntBASIC3.09□□□□□ -1.91
APOC1P02654 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 RPS15AP1-201ENST00000457423 391 ntBASIC3.09□□□□□ -1.91
APOC1P02654 RPL7P15-201ENST00000461190 712 ntBASIC3.09□□□□□ -1.91
APOC1P02654 RPL23AP12-201ENST00000467573 473 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 AP000563.1-201ENST00000490865 758 ntBASIC3.09□□□□□ -1.91
APOC1P02654 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.09□□□□□ -1.91
APOC1P02654 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.09□□□□□ -1.91
APOC1P02654 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.09□□□□□ -1.91
APOC1P02654 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
APOC1P02654 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.09□□□□□ -1.91
APOC1P02654 AC006116.10-201ENST00000591836 581 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC020914.6-201ENST00000594327 272 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC006557.5-201ENST00000603126 811 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC099676.1-201ENST00000608886 657 ntBASIC3.09□□□□□ -1.91
APOC1P02654 AC105105.5-201ENST00000622635 1294 ntBASIC3.09□□□□□ -1.91
APOC1P02654 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOC1P02654 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOC1P02654 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.09□□□□□ -1.92
APOC1P02654 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOC1P02654 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOC1P02654 AC017071.1-201ENST00000564407 2204 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AC007656.2-201ENST00000624902 4547 ntBASIC3.08□□□□□ -1.92
APOC1P02654 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
APOC1P02654 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APOC1P02654 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
APOC1P02654 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APOC1P02654 RNA5SP107-201ENST00000411358 122 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.08□□□□□ -1.92
APOC1P02654 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.08□□□□□ -1.92
APOC1P02654 SETP8-201ENST00000435341 628 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.08□□□□□ -1.92
APOC1P02654 AC084357.1-201ENST00000473404 255 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AC005912.1-201ENST00000495392 255 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.08□□□□□ -1.92
APOC1P02654 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.08□□□□□ -1.92
APOC1P02654 RN7SKP18-201ENST00000516005 275 ntBASIC3.08□□□□□ -1.92
APOC1P02654 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AP006245.1-201ENST00000522549 120 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.08□□□□□ -1.92
APOC1P02654 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.08□□□□□ -1.92
APOC1P02654 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms