Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC106754.1-201ENST00000562632 1513 ntBASIC3.88□□□□□ -1.79
NPIPA3F8WFD2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA3F8WFD2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA3F8WFD2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NPIPA3F8WFD2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA3F8WFD2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 IL6STP1-201ENST00000346911 1020 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RNU1-14P-201ENST00000362759 152 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RNU6-582P-201ENST00000362989 107 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RNU1-85P-201ENST00000364127 164 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RNU1-64P-201ENST00000365443 163 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 BTBD10P2-201ENST00000404779 676 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 ZNF603P-201ENST00000405613 487 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RN7SKP235-201ENST00000410662 305 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC233981.1-201ENST00000423224 461 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL157831.1-201ENST00000426134 473 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 COX6CP15-201ENST00000426313 211 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RAC1P8-201ENST00000427086 527 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 COX6B1P7-201ENST00000430845 235 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL645638.1-201ENST00000440519 361 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 HMGB1P16-201ENST00000447155 540 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 TVP23BP2-201ENST00000455082 615 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RPL7P22-201ENST00000466005 733 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC113420.1-201ENST00000507903 571 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC021146.3-201ENST00000511911 260 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RN7SKP277-201ENST00000516895 283 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC245884.10-201ENST00000597355 337 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL109618.2-201ENST00000605527 211 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL354760.1-201ENST00000608357 643 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC099669.2-201ENST00000616549 437 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC004825.2-201ENST00000616634 455 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL161637.1-201ENST00000622380 412 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP196-201ENST00000625967 102 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 OR11H5P-202ENST00000641612 1325 ntBASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA3F8WFD2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 Z82217.1-201ENST00000625157 8149 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC067945.1-201ENST00000342609 618 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP388-201ENST00000362584 119 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RNU6-1243P-201ENST00000364028 107 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SNORD116-12-201ENST00000384468 92 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SNORA37-201ENST00000384504 129 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SNORD116-23-201ENST00000384645 92 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 MTCO3P31-201ENST00000405526 789 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RN7SKP27-201ENST00000410684 333 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RPS12P23-201ENST00000419579 400 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RPEP2-201ENST00000432149 701 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 HSFY6P-201ENST00000445573 403 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 COX6CP18-201ENST00000448769 222 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms