Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 USP9YP5-201ENST00000511770 630 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC010374.2-201ENST00000512933 535 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC093853.1-201ENST00000515689 483 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-1308P-201ENST00000516817 103 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC103833.1-201ENST00000517442 172 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC092451.2-201ENST00000538746 658 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC023158.1-201ENST00000561632 1025 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC005242.1-201ENST00000585658 438 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 VN1R84P-201ENST00000593697 235 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 KATNBL1P5-201ENST00000605015 517 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RNA5SP196-201ENST00000625967 102 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC100871.1-201ENST00000507871 1456 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC007685.1-201ENST00000329806 452 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AL034403.1-201ENST00000399414 885 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 RN7SKP263-201ENST00000411194 309 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC006539.3-201ENST00000454258 129 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 RPL23AP12-201ENST00000467573 473 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 RPL7L1P8-201ENST00000469911 741 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC087312.1-201ENST00000471411 480 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 FTH1P24-201ENST00000503502 462 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 SNORA70.19-201ENST00000516717 90 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 MIR2116-201ENST00000517221 80 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AP001636.2-201ENST00000525517 696 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 MTND5P21-201ENST00000531961 522 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 MTND4LP25-201ENST00000570218 163 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 MTCO2P22-201ENST00000603246 681 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 PSMA6P4-201ENST00000603247 718 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC010680.3-201ENST00000604215 520 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 MIR6875-201ENST00000617506 72 ntBASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
TRIM49D1C9J1S8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
TRIM49D1C9J1S8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 RN7SKP53-201ENST00000411337 315 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC009237.5-201ENST00000414271 501 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 UBE2D3P3-201ENST00000426992 425 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 CACYBPP1-201ENST00000438592 684 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 HSFY6P-201ENST00000445573 403 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC007967.1-201ENST00000455422 1159 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 RPL7P48-201ENST00000461513 746 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 RPL6P9-201ENST00000466502 859 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms