Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC025574.2-201ENST00000615621 514 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC099494.2-201ENST00000623371 978 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC091953.2-201ENST00000623979 160 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MTND1P37-201ENST00000636562 264 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 CKAP2P1-201ENST00000555477 2049 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 NCOA4P3-201ENST00000513203 1877 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 ZNF652P1-201ENST00000442420 1309 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 MAPK10-344ENST00000641718 3746 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 RNU6-249P-201ENST00000363016 102 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 RNU6-359P-201ENST00000365466 108 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 RNU6-108P-201ENST00000365558 107 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 RNU6-1011P-201ENST00000384668 107 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AL133388.1-201ENST00000404509 287 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AL035410.1-201ENST00000427409 427 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 GPR143P-201ENST00000434155 205 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC079781.2-201ENST00000446424 169 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AP001992.1-205ENST00000462248 379 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC083798.1-201ENST00000472671 131 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AL035690.1-201ENST00000490892 383 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC096754.1-201ENST00000508904 818 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC110792.2-201ENST00000510278 224 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC093853.1-201ENST00000515689 483 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AP003072.2-201ENST00000527756 676 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 MIR4284-201ENST00000578924 81 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC008782.1-201ENST00000603386 430 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC007566.2-201ENST00000603642 413 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AL450226.2-201ENST00000622913 439 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC104162.1-201ENST00000430831 2382 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 NMD3P1-201ENST00000439704 1488 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 AC011460.1-201ENST00000636268 1834 ntBASIC6.53□□□□□ -1.36
TMEM88BA6NKF7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
TMEM88BA6NKF7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 SAGE4P-201ENST00000442271 3381 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 Y_RNA.72-201ENST00000362894 103 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 RNU1-146P-201ENST00000364015 165 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 Y_RNA.234-201ENST00000364409 97 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 RNU6-373P-201ENST00000411247 98 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 RWDD4P2-201ENST00000426392 563 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 AC006548.1-201ENST00000427470 102 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 AC093156.1-201ENST00000440382 670 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 PMCHL2-203ENST00000457791 237 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 RPS23P2-201ENST00000463671 415 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 RAB11AP2-201ENST00000545905 639 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 TVP23CP2-201ENST00000571473 623 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 MIR3167-201ENST00000579623 85 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 Z95327.3-201ENST00000610385 572 ntBASIC6.52□□□□□ -1.37
TMEM88BA6NKF7 MIR7703-201ENST00000620784 77 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms