Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RBFOX3A6NFN3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AL512646.1-201ENST00000269395 1077 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 SNORA7.2-201ENST00000364446 145 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 SNORA62-201ENST00000365493 153 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 MTHFD2P2-201ENST00000407725 247 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 RNU2-17P-201ENST00000410290 190 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 RNA5SP107-201ENST00000411358 122 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 HSPE1P12-201ENST00000412576 301 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 XKRYP4-201ENST00000414395 483 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 MTND2P16-201ENST00000419987 799 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 TCEA1P2-201ENST00000420496 906 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC073143.1-201ENST00000436316 395 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 XKRYP5-201ENST00000449659 483 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 CYCSP42-201ENST00000450823 238 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 RPL23AP24-201ENST00000458203 385 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 RPS4XP2-201ENST00000458402 793 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 HMGB3P14-201ENST00000494195 599 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC016065.2-201ENST00000514530 444 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC099522.1-202ENST00000514718 367 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 RNA5SP208-201ENST00000516156 78 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC034205.1-201ENST00000520621 638 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC087369.1-201ENST00000520775 996 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 C1GALT1P3-201ENST00000522049 819 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC010306.1-201ENST00000523223 1117 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 OR8G5-201ENST00000524943 1041 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 OR5AK3P-201ENST00000527486 1297 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC139103.1-201ENST00000534696 1030 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC004024.1-201ENST00000549244 247 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AL845331.3-202ENST00000562856 261 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC008507.1-201ENST00000587506 734 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 HMGN2P28-201ENST00000606102 262 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 MIR8058-201ENST00000615737 89 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC025016.1-201ENST00000616746 682 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC006338.2-201ENST00000616864 791 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 MIR7151-201ENST00000617477 60 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 MIR7703-201ENST00000620784 77 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AC048347.1-201ENST00000624621 427 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 AL732372.2-225ENST00000642124 456 ntBASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
RBFOX3A6NFN3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC138915.3-201ENST00000562908 1389 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 RPL32P3-201ENST00000359025 275 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 MIR199A2-201ENST00000385289 110 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 RNA5SP31-201ENST00000411144 127 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC011933.1-201ENST00000413334 321 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC244098.2-201ENST00000422068 99 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 GLRXP1-201ENST00000423261 334 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 RPL18P10-201ENST00000425606 538 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 FAR1P1-201ENST00000427163 934 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AL590623.1-201ENST00000427864 105 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 RPS27AP12-201ENST00000429552 465 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC016712.1-201ENST00000431088 378 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 NDUFB1P1-201ENST00000435191 180 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 FTH1P1-201ENST00000437933 532 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC239367.2-201ENST00000447309 705 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC006480.1-201ENST00000449887 378 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC099563.1-201ENST00000456086 418 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC116533.1-201ENST00000459748 321 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 RPL21P11-201ENST00000461458 483 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC008958.1-201ENST00000511047 682 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC010476.1-201ENST00000519111 851 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms