Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC009318.3-201ENST00000616916 503 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 STMN1P1-201ENST00000617809 440 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 BX649567.1-201ENST00000642071 1134 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC073055.1-201ENST00000456901 1621 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 SEC63P2-201ENST00000503863 1939 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AL137100.1-201ENST00000556703 1620 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 Y_RNA.472-201ENST00000384322 102 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AL583835.1-201ENST00000399570 407 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 LIPT1P1-201ENST00000415870 1186 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC127526.1-201ENST00000417526 366 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 MTND4P3-201ENST00000417829 541 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC092634.2-201ENST00000428146 1010 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 ELOCP11-201ENST00000436690 332 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 SKP1P1-201ENST00000438081 489 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 HMGB1P37-201ENST00000439613 609 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 ELOCP16-201ENST00000444494 332 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 MTND1P33-201ENST00000446251 917 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 PHBP16-201ENST00000446318 950 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AL050341.1-201ENST00000447743 313 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 MTND2P8-201ENST00000450555 1025 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC098824.1-201ENST00000453565 980 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 ANP32BP2-201ENST00000454525 545 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 RNA5SP246-201ENST00000458909 119 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 RPL12P20-201ENST00000475538 479 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 TRBV8-2-201ENST00000475637 270 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 PPIAP15-201ENST00000479662 484 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC134050.1-201ENST00000495088 933 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC008953.1-201ENST00000497334 318 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 KCTD9P2-201ENST00000512203 1013 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 LRRC6P1-201ENST00000532188 885 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 POLR2KP1-201ENST00000553226 168 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC084783.1-201ENST00000565846 910 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 MTCO1P40-201ENST00000574371 625 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC022655.2-201ENST00000577280 318 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC114878.2-201ENST00000604863 1251 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC024060.1-201ENST00000607052 494 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC079395.3-201ENST00000615161 484 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC111188.2-201ENST00000529697 1387 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 EIF2AP4-201ENST00000424793 1781 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDE1Q9NXR1 AC131971.1-201ENST00000332881 1482 ntBASIC3.86□□□□□ -1.79
NDE1Q9NXR1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RAD17P1-201ENST00000418130 2042 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL592148.3-201ENST00000608771 2646 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 SNORD116-12-201ENST00000384468 92 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RNU6-225P-201ENST00000384613 103 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 MIR550A3-201ENST00000390735 95 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RNU6-1242P-201ENST00000391052 103 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 HSPE1P8-201ENST00000406997 288 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RPL7AP73-201ENST00000413490 353 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 MFSD13B-201ENST00000420133 1290 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL356387.2-201ENST00000422272 243 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 OR5AW1P-201ENST00000426334 1006 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC104837.2-201ENST00000427236 424 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms