Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX3Q99909 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX3Q99909 AL133338.2-201ENST00000604292 736 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.76□□□□□ -1.81
SSX3Q99909 AC084824.4-201ENST00000620106 731 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 AC124312.6-202ENST00000623624 418 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 AP003485.1-201ENST00000625093 753 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX3Q99909 U3.53-201ENST00000628922 216 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 AF001550.2-201ENST00000636643 217 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SSX3Q99909 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX3Q99909 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSX3Q99909 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX3Q99909 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX3Q99909 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX3Q99909 MTND4P10-201ENST00000446199 1363 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 ZNF37BP-203ENST00000452306 1352 ntBASIC3.76□□□□□ -1.81
SSX3Q99909 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX3Q99909 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX3Q99909 MFSD8-216ENST00000641147 4009 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSX3Q99909 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SSX3Q99909 RNU6-263P-201ENST00000363811 107 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 RNU1-32P-201ENST00000363937 159 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX3Q99909 MIR141-201ENST00000384975 95 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 MIR122-201ENST00000385044 85 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 RNA5SP397-201ENST00000391323 118 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 RN7SKP167-201ENST00000411047 285 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 RPL31P2-201ENST00000413849 377 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 RPS3AP9-201ENST00000417027 792 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AL513174.1-201ENST00000423182 629 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC233981.1-201ENST00000423224 461 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 RPP40P1-201ENST00000426762 456 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 MTCYBP32-201ENST00000427945 1084 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC114973.1-201ENST00000429057 632 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX3Q99909 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 MTCYBP42-201ENST00000444653 1130 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 ANP32BP2-201ENST00000454525 545 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 GAPDHP39-201ENST00000481866 979 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 PRELID3BP6-201ENST00000503839 571 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX3Q99909 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX3Q99909 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX3Q99909 MTCO3P15-201ENST00000526563 574 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX3Q99909 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 MTCYBP41-201ENST00000528913 1123 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SSX3Q99909 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX3Q99909 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX3Q99909 AC122134.1-202ENST00000569111 1201 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 MIR4666A-201ENST00000580160 79 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX3Q99909 BNIP3P39-201ENST00000601077 554 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC096947.1-201ENST00000603233 470 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC023762.1-201ENST00000603280 584 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX3Q99909 AC112220.2-201ENST00000605513 533 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AL121652.1-201ENST00000608851 448 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 AP005137.2-201ENST00000609238 400 ntBASIC3.75□□□□□ -1.81
SSX3Q99909 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SSX3Q99909 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSX3Q99909 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
SSX3Q99909 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSX3Q99909 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 AC018555.1-201ENST00000567548 1980 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 AC066616.2-201ENST00000559334 1481 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 MAPK10-372ENST00000641954 3413 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SSX3Q99909 RNU1-85P-201ENST00000364127 164 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 RNU6-441P-201ENST00000384545 106 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX3Q99909 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SSX3Q99909 EI24P1-201ENST00000416584 867 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 TOMM22P1-201ENST00000418578 312 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 UQCRBP1-201ENST00000421129 336 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX3Q99909 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.74□□□□□ -1.81
SSX3Q99909 Z74021.1-201ENST00000423610 407 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 COX6CP15-201ENST00000426313 211 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 AC017083.1-201ENST00000428093 483 ntBASIC3.74□□□□□ -1.81
SSX3Q99909 RPL21P112-201ENST00000434403 463 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms