Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC006386.2-201ENST00000624491 75 ntBASIC3.86□□□□□ -1.79
CDK5RAP2Q96SN8 AC012005.1-201ENST00000624575 75 ntBASIC3.86□□□□□ -1.79
CDK5RAP2Q96SN8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP2Q96SN8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 CEP170P1-201ENST00000502249 4587 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 RNU6-1279P-201ENST00000383917 103 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 HSPD1P16-201ENST00000402302 394 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 RNA5SP31-201ENST00000411144 127 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 AC073136.2-201ENST00000417282 849 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 AJ239321.1-201ENST00000424255 564 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 AC239809.1-201ENST00000450470 217 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 AC107015.1-201ENST00000466902 747 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 RPS27AP18-201ENST00000515536 459 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 AC110741.2-201ENST00000605278 268 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 HSPA8P1-201ENST00000425843 1833 ntBASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP2Q96SN8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 S100A11P2-201ENST00000467589 312 ntBASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 MIR4738-201ENST00000579134 87 ntBASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 SCARNA15.3-201ENST00000626315 122 ntBASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 SCARNA4.1-201ENST00000628597 123 ntBASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDK5RAP2Q96SN8 SAGE4P-201ENST00000442271 3381 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 AC108206.1-201ENST00000570186 4159 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 Y_RNA.510-201ENST00000384511 114 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 BX679664.1-201ENST00000434429 253 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 RPS12P18-201ENST00000442381 270 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 AC005242.1-201ENST00000585658 438 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 AC132825.8-201ENST00000640783 297 ntBASIC3.84□□□□□ -1.8
CDK5RAP2Q96SN8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 SNORA38.1-201ENST00000364172 131 ntBASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AC126124.2-201ENST00000413542 321 ntBASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AL450263.2-201ENST00000439400 589 ntBASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 TMED11P-201ENST00000479478 690 ntBASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 MIR2114-201ENST00000516645 80 ntBASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AC087468.1-201ENST00000604365 630 ntBASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 AL162574.2-201ENST00000614618 657 ntBASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP2Q96SN8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 AL031121.1-201ENST00000406553 254 ntBASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 PPIAP17-201ENST00000438507 471 ntBASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 RPL12P26-201ENST00000452430 487 ntBASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 RPS29P26-201ENST00000477483 171 ntBASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 AC004024.1-201ENST00000549244 247 ntBASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP2Q96SN8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms