Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPS4XP15-201ENST00000489210 795 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 FCF1P3-201ENST00000496394 590 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 SNORA31.9-201ENST00000516429 84 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC005344.1-201ENST00000613391 459 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC110801.1-201ENST00000623590 212 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AP003072.5-201ENST00000623872 773 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC073342.3-201ENST00000624211 193 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC007256.1-201ENST00000392253 2765 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 MTND5P3-201ENST00000438536 1800 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 FAM35CP-201ENST00000554755 2470 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 FAM91A3P-201ENST00000456826 2544 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 SNORD56.3-201ENST00000363507 71 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 U3.11-201ENST00000364476 212 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 RNU6-356P-201ENST00000384140 107 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 RNU6-532P-201ENST00000384318 107 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 MIR887-201ENST00000401258 79 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 RNA5SP31-201ENST00000411144 127 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC068533.1-201ENST00000418542 415 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 HMGB1P12-201ENST00000438594 598 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 RPS15AP1-201ENST00000457423 391 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC091564.1-201ENST00000464563 479 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC023598.1-201ENST00000472521 361 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC005726.1-201ENST00000494679 427 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 POU5F1P7-201ENST00000508759 541 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 CYCSP30-201ENST00000546447 172 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC051619.2-201ENST00000559063 397 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 MIR4284-201ENST00000578924 81 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 MIR3138-201ENST00000585238 82 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC245128.3-201ENST00000594721 748 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC006077.1-201ENST00000604746 343 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC022079.2-201ENST00000619739 566 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC022149.2-201ENST00000621061 203 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AP003355.3-201ENST00000623465 114 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC112484.5-201ENST00000624189 228 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AP004289.2-201ENST00000444413 1457 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 AC068647.1-201ENST00000489539 2265 ntBASIC2.62□□□□□ -1.99
AP1S3Q96PC3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
AP1S3Q96PC3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 SNORA58B-201ENST00000364259 136 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 SNORA3.3-201ENST00000408712 125 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 RNA5SP344-201ENST00000411081 104 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 AL356095.1-201ENST00000417217 199 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 AC093151.1-201ENST00000427711 313 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 AC074367.1-201ENST00000438685 1125 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 HSPE1P28-201ENST00000443139 211 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 ARL5AP2-201ENST00000444698 533 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 AL357552.1-201ENST00000445254 415 ntBASIC2.61□□□□□ -1.99
AP1S3Q96PC3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.61□□□□□ -1.99
AP1S3Q96PC3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms