Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AL356473.1-201ENST00000406203 1408 ntBASIC5.12□□□□□ -1.59
PGBD1Q96JS3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PGBD1Q96JS3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PGBD1Q96JS3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PGBD1Q96JS3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC139713.2-215ENST00000641428 5037 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 RNU1-108P-201ENST00000362556 161 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 RNA5SP307-201ENST00000362863 116 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 RNU4-7P-201ENST00000364758 141 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 OR5H15-201ENST00000383696 930 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AL031577.2-201ENST00000404133 280 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 NPM1P11-201ENST00000417106 855 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC006366.1-201ENST00000422002 759 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 RPL18P10-201ENST00000425606 538 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 MTCO1P3-201ENST00000429327 192 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 GTF2IP7-202ENST00000436677 309 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 FHP1-201ENST00000442741 703 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC012671.1-201ENST00000451912 203 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 RPL30P6-201ENST00000475925 342 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 NDUFA5P2-201ENST00000519723 344 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC092851.1-201ENST00000535964 478 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 ISCA1P3-201ENST00000577104 373 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 BNIP3P26-201ENST00000600827 554 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC107304.1-201ENST00000604229 296 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AL451074.6-201ENST00000608512 729 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 AC119674.1-212ENST00000641155 993 ntBASIC5.11□□□□□ -1.59
PGBD1Q96JS3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PGBD1Q96JS3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 RNU6-185P-201ENST00000384421 107 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 RNU6-1263P-201ENST00000384601 106 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AF274854.1-201ENST00000413236 615 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 CCT8P1-201ENST00000413611 1657 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AL592293.2-201ENST00000422292 996 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 ZNF833P-201ENST00000424938 1494 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 MTND4P31-201ENST00000425607 1343 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 GEMIN8P3-201ENST00000445417 720 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 DNAJC19P8-201ENST00000452887 259 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 DDX39BP2-208ENST00000453923 258 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 RN7SL481P-201ENST00000477764 299 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 RPL7P18-201ENST00000478965 734 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 NCOR1P1-202ENST00000486162 291 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC005178.1-201ENST00000508392 440 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 HMGB1P19-201ENST00000517578 577 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC009643.1-201ENST00000532030 391 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC012435.1-202ENST00000568772 240 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC011260.1-201ENST00000578420 472 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 SNORD39.2-201ENST00000579995 76 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AL021997.1-201ENST00000605757 193 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AL138721.1-201ENST00000616756 179 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 MIR6810-201ENST00000622701 70 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC025263.3-201ENST00000622965 1396 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AL359715.5-201ENST00000623431 443 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC007546.2-201ENST00000623996 360 ntBASIC5.1□□□□□ -1.59
PGBD1Q96JS3 AC092656.1-203ENST00000624134 423 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms