Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RN7SL176P-201ENST00000580352 264 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AL109653.1-201ENST00000603091 248 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC008966.2-201ENST00000606157 453 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 LINC00901.1-201ENST00000617252 152 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AL603755.1-201ENST00000619504 163 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AP000676.3-201ENST00000623299 569 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 MTND5P31-201ENST00000419366 1374 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 EOGT-210ENST00000615922 1931 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 OR14L1P-202ENST00000641545 3009 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC012321.1-201ENST00000561622 1588 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 RNU1-85P-201ENST00000364127 164 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 ATP5F1P3-201ENST00000397213 657 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AL078604.1-201ENST00000404609 466 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 P2RY10P2-201ENST00000416730 913 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 BX510359.2-201ENST00000417920 305 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC098592.1-201ENST00000419352 333 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC011233.1-201ENST00000422812 283 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC009480.2-201ENST00000422916 432 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AL138878.2-201ENST00000440581 1241 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 RPF2P2-201ENST00000504693 896 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC108043.1-201ENST00000512696 574 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 DYNLL1P4-201ENST00000549314 266 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC234771.5-201ENST00000600161 514 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AL359535.1-201ENST00000612100 1087 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AL359757.1-201ENST00000623176 255 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC103706.2-201ENST00000638080 240 ntBASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4CQ96CF2 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 CYP1D1P-201ENST00000416662 1433 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC011155.1-201ENST00000316512 456 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RNU6-251P-201ENST00000363235 104 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RNU6-1293P-201ENST00000384077 107 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 SDHCP2-201ENST00000398565 501 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AL590084.2-201ENST00000401481 382 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RNU4-72P-201ENST00000410754 173 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 FAR2P2-201ENST00000413041 594 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 FAR2P4-202ENST00000425399 584 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 DNAJC19P7-201ENST00000428811 344 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC016712.1-201ENST00000431088 378 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RPS26P56-201ENST00000444468 240 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 snoU13.1-201ENST00000459157 104 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RN7SL860P-201ENST00000473738 223 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RN7SL41P-201ENST00000476144 297 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC013828.1-201ENST00000481845 158 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 UBE2NP1-201ENST00000545592 458 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC074029.1-201ENST00000552531 1044 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC013444.2-201ENST00000603317 787 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC106791.2-201ENST00000604680 391 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AL139418.1-201ENST00000613613 177 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms