Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC091862.1-201ENST00000438016 1100 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AGGF1P3-201ENST00000493675 1213 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 EIF4BP1-201ENST00000554881 351 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC136601.2-201ENST00000604356 474 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 HSPA8P19-201ENST00000505359 1517 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AL133383.2-201ENST00000622958 2336 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AL589765.3-201ENST00000446084 462 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 RNA5SP217-201ENST00000515959 91 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AP001636.2-201ENST00000525517 696 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC110741.2-201ENST00000605278 268 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 YPEL5P2-201ENST00000605553 359 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AC013412.1-201ENST00000610687 192 ntBASIC3.45□□□□□ -1.86
SHROOM3Q8TF72 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 MTCO1P24-201ENST00000515438 1558 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 ZNF826P-207ENST00000622273 1910 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AL513174.1-201ENST00000423182 629 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC073387.1-201ENST00000453261 709 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC021146.1-201ENST00000511202 716 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC022616.2-201ENST00000523185 300 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC092851.1-201ENST00000535964 478 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 MIR5680-201ENST00000577577 84 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC015911.5-201ENST00000587076 451 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 AC017071.1-201ENST00000564407 2204 ntBASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SHROOM3Q8TF72 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 RNU6-729P-201ENST00000384399 107 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 SNORA81-201ENST00000408493 178 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 OR5H3P-201ENST00000502817 919 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC118465.1-201ENST00000513820 1271 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 HIGD1AP1-201ENST00000550979 275 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 LARP7P3-201ENST00000579888 337 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC105227.2-201ENST00000615075 605 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 RPL31P12-201ENST00000422587 358 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC005326.1-201ENST00000429197 123 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 RPL21P110-201ENST00000433345 446 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC000041.1-201ENST00000439655 175 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 MTND4LP12-201ENST00000448237 295 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 CCRL1P1-201ENST00000449542 1053 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms