Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.46□□□□□ -1.69
SNED1Q8TER0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SNED1Q8TER0 AC008011.1-201ENST00000545989 227 ntBASIC4.46□□□□□ -1.69
SNED1Q8TER0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.46□□□□□ -1.69
SNED1Q8TER0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.46□□□□□ -1.69
SNED1Q8TER0 AC091057.3-201ENST00000602684 733 ntBASIC4.46□□□□□ -1.69
SNED1Q8TER0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.46□□□□□ -1.69
SNED1Q8TER0 AL133370.2-201ENST00000619934 439 ntBASIC4.46□□□□□ -1.69
SNED1Q8TER0 AC004808.1-201ENST00000627671 721 ntBASIC4.46□□□□□ -1.69
SNED1Q8TER0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SNED1Q8TER0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SNED1Q8TER0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SNED1Q8TER0 AC012321.1-201ENST00000561622 1588 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNED1Q8TER0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNED1Q8TER0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNED1Q8TER0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNED1Q8TER0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNED1Q8TER0 BMS1P3-201ENST00000372011 932 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 RNY3P9-201ENST00000384727 106 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 MIR7-1-201ENST00000384871 110 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 MIR1289-1-201ENST00000408836 144 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC017079.2-201ENST00000416102 485 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 BOLA3P4-201ENST00000418151 400 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 OR6K4P-201ENST00000423179 955 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC022022.1-201ENST00000430304 178 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 KCTD9P3-201ENST00000434597 1169 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 MTND2P22-201ENST00000444325 1033 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 Z77249.1-201ENST00000444622 1175 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AL035551.1-201ENST00000446931 348 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 MTND2P8-201ENST00000450555 1025 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 RPL26P28-201ENST00000451325 435 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC022795.1-201ENST00000473808 480 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 RNA5SP154-201ENST00000516193 111 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AL109741.3-201ENST00000561748 592 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC079148.1-201ENST00000565944 819 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC006386.1-201ENST00000619436 415 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AL445493.3-201ENST00000619568 477 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AP006248.3-201ENST00000623580 594 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC019226.2-201ENST00000625973 424 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.46□□□□□ -1.7
SNED1Q8TER0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.46□□□□□ -1.7
SNED1Q8TER0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNED1Q8TER0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNED1Q8TER0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNED1Q8TER0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNED1Q8TER0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNED1Q8TER0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 SNORA68.2-201ENST00000391263 128 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 AP000936.3-201ENST00000438127 255 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 DUXAP8-207ENST00000456786 622 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 RPL31P53-201ENST00000457065 348 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNED1Q8TER0 RPL21P13-201ENST00000488305 481 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 AC090888.2-201ENST00000559765 1144 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 MIR5186-201ENST00000577504 120 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 MIR4325-201ENST00000583049 90 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 DUXAP10-204ENST00000612052 616 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 AC022079.1-201ENST00000621546 602 ntBASIC4.45□□□□□ -1.7
SNED1Q8TER0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNED1Q8TER0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
SNED1Q8TER0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms