Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC074367.1-201ENST00000438685 1125 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 NUTF2P3-201ENST00000448540 384 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 ACTG1P13-201ENST00000486987 1043 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RPL5P23-201ENST00000496040 868 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 FCF1P3-201ENST00000496394 590 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC034205.1-201ENST00000520621 638 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 C1GALT1P3-201ENST00000522049 819 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC008011.1-201ENST00000545989 227 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 TGIF1P1-201ENST00000558095 802 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC015726.1-201ENST00000602353 681 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RMST_8.1-201ENST00000610287 165 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AL136295.6-201ENST00000610486 658 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 HPVC1-201ENST00000629899 1198 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 U6.107-201ENST00000637108 79 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC022031.1-201ENST00000585985 2593 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RLIMP1-201ENST00000339626 1680 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AL049737.1-201ENST00000413920 1403 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 RNA5SP42-201ENST00000364278 115 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 OR6C69P-201ENST00000394268 893 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 BTBD7P2-201ENST00000441962 620 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC092685.1-201ENST00000447960 1243 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 MRPS31P2-201ENST00000451581 518 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC096992.1-201ENST00000459808 709 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC089999.1-201ENST00000460336 374 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 TRBV8-2-201ENST00000475637 270 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AL035404.1-201ENST00000497982 568 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC110792.2-201ENST00000510278 224 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC023575.1-201ENST00000580510 358 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AL592436.1-201ENST00000605135 558 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AL118556.2-201ENST00000614375 824 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC245389.2-201ENST00000616023 576 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC243756.2-201ENST00000618406 463 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC242843.1-201ENST00000618702 573 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 AC020978.9-201ENST00000624380 1141 ntBASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUDCD3Q8IVD9 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 RNU6-1005P-201ENST00000384519 107 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 HMGB3P18-201ENST00000406327 590 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 HNRNPDP2-201ENST00000406475 478 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AL807761.1-201ENST00000417622 171 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 OSTCP5-201ENST00000425293 453 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 ARF4P2-201ENST00000430209 526 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 PTP4A1P3-201ENST00000433661 420 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 MRPS18BP2-201ENST00000434310 759 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 RPS27P5-201ENST00000444247 244 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 CYCSP53-201ENST00000455540 265 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC078785.3-201ENST00000476607 425 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 UBE2CP3-201ENST00000502715 450 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms