Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RPL23AP38-201ENST00000423801 469 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 IFNNP1-201ENST00000429219 553 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 FTH1P6-201ENST00000430768 320 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 MTCYBP42-201ENST00000444653 1130 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 RN7SL812P-201ENST00000493791 279 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 RNU6-885P-201ENST00000516607 104 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 PHBP17-201ENST00000528576 541 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 OR6C73P-201ENST00000546432 358 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 OR1AB1P-201ENST00000585564 761 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC005255.1-201ENST00000593748 216 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AL022067.1-201ENST00000602426 454 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AL606834.3-201ENST00000602615 496 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AL354984.3-201ENST00000604803 325 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC112220.2-201ENST00000605513 533 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AL021997.2-201ENST00000615674 271 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AL158196.1-201ENST00000616786 434 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AC019278.1-201ENST00000623516 479 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF39Q86UA1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF39Q86UA1 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PRPF39Q86UA1 NOL8P1-201ENST00000508336 3529 ntBASIC4.4□□□□□ -1.7
PRPF39Q86UA1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF39Q86UA1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF39Q86UA1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF39Q86UA1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RNU6-582P-201ENST00000362989 107 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RNU6-839P-201ENST00000363347 108 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RNU6-224P-201ENST00000384055 107 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RNU6-1226P-201ENST00000384317 107 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RNU6-925P-201ENST00000384629 104 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AL355379.1-201ENST00000405542 640 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AL133264.1-201ENST00000407157 562 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 MTND4P22-201ENST00000413116 1169 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RPS23P10-201ENST00000416185 486 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC027644.1-201ENST00000419595 298 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC092832.1-201ENST00000422934 400 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RPL23AP52-201ENST00000439311 478 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC092393.1-201ENST00000439625 742 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 RPL7P22-201ENST00000466005 733 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AP000926.1-201ENST00000479573 241 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC010374.2-201ENST00000512933 535 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC104057.1-201ENST00000515547 497 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 SNORA19.3-201ENST00000516165 130 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AP003730.1-201ENST00000524605 285 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC019227.1-201ENST00000526902 510 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AL352979.3-201ENST00000553515 247 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC093519.1-201ENST00000566109 298 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 MIR3160-1-201ENST00000577972 85 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 MIR5708-201ENST00000579723 85 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 GAS5-AS1-201ENST00000602767 694 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 U73479.1-201ENST00000618062 168 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC068722.2-201ENST00000618734 544 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC022306.3-201ENST00000619930 550 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC098679.5-201ENST00000624394 571 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 AC140479.6-201ENST00000633535 357 ntBASIC4.4□□□□□ -1.71
PRPF39Q86UA1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF39Q86UA1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms