Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC134698.5-201ENST00000519444 336 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC044913.1-201ENST00000557200 430 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC084783.1-201ENST00000565846 910 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC074051.3-201ENST00000570238 358 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC107982.3-201ENST00000584957 985 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 BNIP3P26-201ENST00000600827 554 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC115286.1-201ENST00000604298 434 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AL135786.2-201ENST00000608422 615 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AL451074.6-201ENST00000608512 729 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AP005137.2-201ENST00000609238 400 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC023158.2-201ENST00000614876 543 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC008083.4-201ENST00000615076 444 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC100827.5-201ENST00000615883 426 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC022509.4-201ENST00000621404 572 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC087821.2-201ENST00000637086 450 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 SEC63P2-201ENST00000503863 1939 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC027514.1-201ENST00000588561 1603 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC103591.2-201ENST00000265259 766 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 OR4K15-201ENST00000305051 1216 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AL672167.1-206ENST00000356293 943 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RNU4-21P-201ENST00000362802 126 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 VDAC2P1-201ENST00000399358 958 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RPS27AP11-201ENST00000402798 447 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 VN1R8P-201ENST00000407739 893 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RNA5SP80-201ENST00000410475 111 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RNU2-50P-201ENST00000410494 143 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RN7SKP216-201ENST00000411050 312 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 MTND4LP11-201ENST00000422184 280 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RPL7P44-201ENST00000424827 742 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 CNOT7P1-201ENST00000429006 852 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AP000942.1-201ENST00000463969 747 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC053481.1-201ENST00000467217 306 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RPL7P18-201ENST00000478965 734 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC008694.2-201ENST00000517591 306 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 IGHV3-63-201ENST00000518422 341 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 MTCYBP41-201ENST00000528913 1123 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC122134.1-201ENST00000565664 1104 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC012414.6-201ENST00000568241 401 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC069061.3-201ENST00000582254 823 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AP001542.2-201ENST00000593141 364 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC006270.3-201ENST00000605967 1036 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AC099676.1-201ENST00000608886 657 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AF001550.2-201ENST00000636643 217 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RAD17P1-201ENST00000418130 2042 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 AL606537.1-201ENST00000607258 2011 ntBASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms