Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 OR8L1P-201ENST00000534005 955 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 RPL21P7-201ENST00000557463 483 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC090888.3-201ENST00000558917 509 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC008507.1-201ENST00000587506 734 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC069307.1-201ENST00000602820 447 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC010680.4-201ENST00000605334 543 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC012360.2-201ENST00000609349 391 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AL158063.1-201ENST00000615349 536 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC139792.2-201ENST00000624218 587 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC135068.12-201ENST00000637370 931 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 LINC01739-205ENST00000641890 573 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC090229.1-201ENST00000590983 1609 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RNA5SP183-201ENST00000362452 119 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 Y_RNA.201-201ENST00000364052 96 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RNA5SP132-201ENST00000364725 118 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 SNORA67-201ENST00000384423 137 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 MTND4LP20-201ENST00000402379 270 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 MTCO2P16-201ENST00000436962 677 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RPS29P10-201ENST00000439197 166 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RPS26P2-201ENST00000440331 348 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 Z92846.1-201ENST00000456203 268 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC010469.1-201ENST00000463864 576 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC087312.1-201ENST00000471411 480 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC017015.1-201ENST00000477387 286 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RPL21P103-201ENST00000479921 488 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RN7SL184P-201ENST00000488308 297 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 OR2A20P-203ENST00000498397 1268 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 IGKV2D-36-201ENST00000518643 226 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL139174.1-201ENST00000531489 886 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 GTF2IP22-201ENST00000554443 182 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL355812.1-201ENST00000603215 216 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL133338.2-201ENST00000604292 736 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL031775.1-201ENST00000607014 887 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC099669.2-201ENST00000616549 437 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC131238.1-201ENST00000617135 328 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC073968.1-201ENST00000618594 637 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC090527.3-201ENST00000619041 548 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC004009.2-201ENST00000623016 728 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AP006248.2-201ENST00000623309 592 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 MIR6715B-201ENST00000637172 77 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 AC135352.1-201ENST00000506173 1418 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 NUP58P1-201ENST00000502546 1738 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF220Q5VTB9 MTND4P16-201ENST00000466108 1367 ntBASIC4.77□□□□□ -1.65
RNF220Q5VTB9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC097714.1-201ENST00000511272 1647 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms