Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 RNA5SP191-201ENST00000362585 102 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 SNORA51.8-201ENST00000384234 132 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 MIR153-1-201ENST00000384914 90 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL590762.2-201ENST00000395798 571 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 RNU6-757P-201ENST00000410334 100 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC114755.2-201ENST00000413520 361 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL772161.1-201ENST00000439130 476 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 RPL12P3-201ENST00000440080 396 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 ZFRP1-201ENST00000457579 2970 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 MTCO2P6-201ENST00000463134 685 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 OR4G11P-201ENST00000492842 939 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC091868.1-201ENST00000508746 304 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 DUXAP5-201ENST00000529668 529 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC021006.3-201ENST00000530771 192 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC008127.2-201ENST00000549925 1075 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC009094.1-201ENST00000564443 426 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 MIR5699-201ENST00000578903 90 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC068790.5-201ENST00000602741 355 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL139395.1-201ENST00000603662 160 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 ELOCP35-201ENST00000604289 336 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL592221.1-201ENST00000605266 382 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 FAM27B-201ENST00000610601 213 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC008083.4-201ENST00000615076 444 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC090246.1-201ENST00000616499 426 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AL390862.1-201ENST00000635467 1469 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC38Q502W7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC38Q502W7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 SNRPEP3-201ENST00000338402 276 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 RNA5SP513-201ENST00000364648 118 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 SNORA51.6-201ENST00000384151 125 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 RNU6-1122P-201ENST00000384449 107 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 RN7SKP216-201ENST00000411050 312 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 OR8G2P-201ENST00000412796 908 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 KCTD10P1-201ENST00000434203 625 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 MTCYBP31-201ENST00000438855 1122 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 OR52J1P-201ENST00000450596 932 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 AL162388.1-201ENST00000450912 352 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 CEACAMP6-201ENST00000452007 574 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 SBDSP1-204ENST00000453858 737 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 AURKAPS2-201ENST00000454983 333 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 AC092757.1-201ENST00000467293 467 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 GAPDHP56-201ENST00000506031 988 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 AC020634.1-201ENST00000608701 549 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 AC087385.3-201ENST00000620477 187 ntBASIC4.79□□□□□ -1.64
CCDC38Q502W7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC38Q502W7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC38Q502W7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC38Q502W7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC38Q502W7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC38Q502W7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms