Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC008264.1-201ENST00000447612 367 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXF1Q12946 CYCSP35-201ENST00000451978 304 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 MTCYBP14-201ENST00000457471 715 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AC010468.1-201ENST00000461022 817 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 CENPBD1P1-201ENST00000464061 469 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 RN7SL330P-201ENST00000469709 307 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AL049830.2-201ENST00000480072 201 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AC112198.1-201ENST00000505369 1220 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF1Q12946 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF1Q12946 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.07□□□□□ -1.92
FOXF1Q12946 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF1Q12946 IGKV2-23-201ENST00000518729 323 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF1Q12946 NDUFB9P3-201ENST00000521269 501 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AL139174.1-201ENST00000531489 886 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 CCNG2P1-201ENST00000549521 1000 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF1Q12946 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.07□□□□□ -1.92
FOXF1Q12946 TGIF1P1-201ENST00000558095 802 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 MIR5186-201ENST00000577504 120 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 MIR5047-201ENST00000579212 100 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AC008739.3-201ENST00000603262 127 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AL355365.1-201ENST00000616480 294 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF1Q12946 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF1Q12946 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF1Q12946 SYT14P1-202ENST00000600441 1448 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 HSPA8P19-201ENST00000505359 1517 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 AC114546.3-201ENST00000623582 1734 ntBASIC3.07□□□□□ -1.92
FOXF1Q12946 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXF1Q12946 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF1Q12946 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF1Q12946 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF1Q12946 AL136964.1-201ENST00000622038 2990 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
FOXF1Q12946 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF1Q12946 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF1Q12946 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF1Q12946 OR6K3-202ENST00000368146 996 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AC093578.1-201ENST00000415219 368 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXF1Q12946 AP000907.1-201ENST00000428428 510 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AL050321.1-201ENST00000432363 400 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AL159987.2-201ENST00000432754 307 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXF1Q12946 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXF1Q12946 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXF1Q12946 SEPT7P6-201ENST00000469999 1143 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AP000926.1-201ENST00000479573 241 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXF1Q12946 AC020893.1-201ENST00000502452 580 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 RN7SKP60-201ENST00000516985 239 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXF1Q12946 DUXAP2-201ENST00000519198 589 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXF1Q12946 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXF1Q12946 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXF1Q12946 MIR4444-1-201ENST00000581696 74 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 MIR4444-2-201ENST00000584390 74 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 GMCL1P2-201ENST00000605230 823 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXF1Q12946 AL450489.1-201ENST00000612071 468 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AC012314.7-201ENST00000619693 93 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AC015967.1-201ENST00000619893 476 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXF1Q12946 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXF1Q12946 U6.105-201ENST00000637379 88 ntBASIC3.06□□□□□ -1.92
FOXF1Q12946 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF1Q12946 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF1Q12946 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
FOXF1Q12946 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXF1Q12946 USP8P1-201ENST00000494673 3183 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXF1Q12946 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
FOXF1Q12946 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXF1Q12946 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXF1Q12946 AC234772.1-201ENST00000377927 937 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 MIR183-201ENST00000384958 110 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 RNU6-328P-201ENST00000390887 106 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 RPS3AP25-201ENST00000411660 793 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXF1Q12946 AL389915.1-201ENST00000422463 466 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 RPL31P12-201ENST00000422587 358 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 YME1L1P1-201ENST00000429435 297 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 OR6C71P-201ENST00000432580 913 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXF1Q12946 TXNP1-201ENST00000441872 371 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 MTCO3P17-201ENST00000443775 513 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC069277.2-201ENST00000454211 432 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.05□□□□□ -1.92
FOXF1Q12946 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXF1Q12946 RPL21P10-201ENST00000463521 490 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXF1Q12946 AC093663.1-201ENST00000497190 394 ntBASIC3.05□□□□□ -1.92
FOXF1Q12946 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXF1Q12946 APOOP4-201ENST00000513530 597 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms